| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1300 |
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| Symbol | |
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| ID | 5200794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1454239 |
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| End bp | 1455201 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580847 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001261803 |
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| Protein GI | 148554221 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGTA CTAAAATTGC GTTGATCGGT GCTGGCAATA TCGGTGGGAC GCTCGCGCAT
CTGGCGGCCT CGAAGGAGCT GGGCGACGTC GTCCTGTTCG ACGTGGTCGA AGGCGTGCCG
CAGGGCAAGG CGCTCGACCT GTCGCAGTGC GGCCCCGTCG AAGGCTTCGA CGCGAAGCTC
AAGGGCACCA ACGACTATGC CGACATCGCG GGCGCGGACG TCATCATCGT CACCGCCGGC
GTCGCCCGCA AGCCGGGCAT GAGCCGCGAC GACCTGCTCG GCATCAACCT GAAGGTCATG
AAGTCGGTCG GCGAGGGCAT CAAGGCGAAC GCCCCCGACG CCTTCGTCAT CTGCATCACC
AACCCGCTCG ACGCGATGGT GTGGGCGCTG CGCGAATTCT CGGGCCTGCC GCACAACAAG
GTCGTCGGCA TGGCCGGCGT CCTCGACTCG GCGCGCTTCG CGACCTTCCT CGCCGAGGAG
TTCAACGTCT CGGTGCAGGA CGTCACCACC TTCGTGCTCG GCGGCCATGG CGACACCATG
GTCCCGGTCG TCGAATATTC GACCGTCGCC GGCATCCCGA TCCCCGACCT GATCAAGATG
GGCTGGTCGA CCCAGGAGCG CATCGACGCG ATCGTCCAGC GCACCCGCAG CGGCGGCGGC
GAGATCGTCG CCCTGCTCAA GACCGGCTCG GCCTTCTACG CGCCCGCCAC CTCGGCGATC
GCGATGGCGG AGAGCTATCT GAAGGACAAG AAGCGGGTCC TGCCCTGCGC CGCCTATCTC
AGCGGCGAAT ATGGCGTCGA CGACCTCTAT GTCGGCGTTC CGGTGATCAT CGGCGCGAAC
GGCGTCGAGA AGATCGTCGA GATCAACCTG TCGGACTCGG CCAAGGCCAA TCTCCAGGTC
TCGGTCGATG CGGTCAAGGA ACTGCTGGTC GCCTGCAAGG GCATCGACAG CTCGCTCGCC
TAA
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| Protein sequence | MARTKIALIG AGNIGGTLAH LAASKELGDV VLFDVVEGVP QGKALDLSQC GPVEGFDAKL
KGTNDYADIA GADVIIVTAG VARKPGMSRD DLLGINLKVM KSVGEGIKAN APDAFVICIT
NPLDAMVWAL REFSGLPHNK VVGMAGVLDS ARFATFLAEE FNVSVQDVTT FVLGGHGDTM
VPVVEYSTVA GIPIPDLIKM GWSTQERIDA IVQRTRSGGG EIVALLKTGS AFYAPATSAI
AMAESYLKDK KRVLPCAAYL SGEYGVDDLY VGVPVIIGAN GVEKIVEINL SDSAKANLQV
SVDAVKELLV ACKGIDSSLA
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