| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1298 |
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| Symbol | sucA |
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| ID | 5200792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1450264 |
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| End bp | 1453176 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580845 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001261801 |
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| Protein GI | 148554219 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.488801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.570221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCG AAGGCGTCGA GTTCGACGGA CCGGAGGGAG TTAGCGCTTC CTTCGTTGAA
TCGCTTTATC GTCAATATCG CTCGGACAAG TCGAGCGTGG AGCCGAGCTG GCAGGACTAT
TTCGCCGGCA TCGAGGCGGG GGTTTCGGGA CCGAGCTGGG CCCGCACCAA CTGGCCGCCG
ACCAGCACCG ACGCGCTGAC CGCGGCGCTC GATCCCACCC AGATGGAGGT GCCCGCCAAG
CCGGCCAAGG CCGGTGGGGC ACCCGCGCCG GCCGTTTCGG CGCCGGCTGC CGGCGCGACG
CCGGCCGAGG TGGAGCAGCG CGCGCTCGAC TCGATCCGCG CGATCATGCT GATCCGCACC
TATCGGGTGC GCGGCCACCT GCTCGCCAAT CTCGATCCGC TCGGCCTGTC GCAGCGCGAG
GAGACGGAGG ACCTGACCCC GGCCTGGCAC GGCTTCACCG AGGCCGACAT GGACCGGCAG
GTCTACATCG CCGGCTTCCT GGGCCTCGAC TGGGCGACCC CGCGCGAGAT CCTCGCCATC
CTCCGCAGGA ACTACTGCGG CAATGTCGGC GTCGAATATA TGCACATCGG CGACGTGGAG
GAGCGGCGCT TCCTCCAGGC GCGGATGGAA GGCAAGGATG CCGAGATCAG CTTCACGCCC
GAGGGCAAGA AGGCGATCCT CAACAAGGTG ATCCACTCCG AGCAGTGGGA GAAGTTCCTG
GGCCGCAAAT ATGTCGGCAC CAAGCGCTTC GGCCTCGACG GCGGCGAATC GATGATCCCC
GCGCTCGAGG CGGTGATCAA ATATTCCGGC GCCTATGGCG TGAACGAGGT CGTGATCGGC
ATGGCCCATC GCGGCCGCCT CAACGTCCTC TCCAACGTCA TGGAGAAGCC CTACCGCGCG
ATCTTCAACG AGTTCGCGGG CGGCTCCTCC AATCCGGAGG ATGTCGGCGG ATCGGGCGAC
GTCAAATATC ACCTCGGCAC CTCGACCGAC CGTGAGTTCG ACGGCAACAA GGTCCACCTG
AGCCTCGCGC CGAACCCGTC GCACCTCGAA TGCGTCAACC CGGTGGTGCT CGGCAAGTCG
CGCGCCAAGC AGACCAAGCT CGACGACCTC GAACGGTCGA AGGTGCTGCC GATCCTGCTG
CACGGCGACG CCGCCTTCGC GGGCCAGGGC ATCATCATGG AGTGCTTCGG CTTCTCCGGC
CTGCGCGGCT ACAACACCGG CGGCACGATC CATTTCGTGA TCAACAACCA GGTGGGCTTC
ACCACCTCGC CGCAGTTCGC GCGCTCCTCG CCCTATCCGT CGGACATCGC GAAGATGGTG
CAGGCGCCGA TCCTGCACGT GAACGGCGAC GATCCCGAGG CCGTCACCTT CGCCTGCAAG
GTGGCGACCG AGTTCCGCCA GACCTTCAAG CGCGACGTCG TGATCGACAT GTGGTGCTAT
CGCCGCTTCG GCCATAACGA AGGCGACGAG CCGGGCTTCA CCCAGCCGCT GATGTACGAG
GCGATCCGCA AGCATCCGCC GGTCAGCGCG ATCTACAGCG CGCGTCTGGT GCAGGAAGGC
GTCATCGACG CCGAATGGAC CGGCAAGGCC GAGGCCGAGT TCGTCGCCCA TCTCGAAACC
GAGTTCGAGG CGGGCAAGGG CTACAAGGTC AACAAGGCCG ACTGGTTCGA AGGCGACTGG
ACCGGCTTCG CCGAGCCGCG CGAGGCGATC ACCGAGCGCC GCGCCGCCGT CACCGGCATC
TCGGCCGAGC TGTTCGAGGA TCTCGGCCGG CAGCTCACGA CCGTCCCCGA GGGGCTGTCG
ATCCACAAGA CGCTCAACCG CATCCTCGAC GCGAAGAAGG AGATGTTCGC GTCGGGCGCC
GGCTTCGACT GGGCGACCGC CGAGGCGCTC GCCTTCGGCT CGCTGCTGCG CGACGGCTAT
GGCGTCCGCC TGTCGGGCCA GGATTCGGGC CGCGGCACCT TCAGCCAGCG GCACGCCGTC
TGGGTCGACC AGAAGGACGG CCACAAGTAC ATCCCGCTCT CGGCGATGGA CCGGCGCTTC
CAGGTGCTCG ACAGCCCGCT GTCCGAATTC GGCGTGCTCG GCTTCGAATA TGGCTATGCG
TCGGCGGCGC CGAACACGCT TGTCATGTGG GAAGCCCAGT TCGGCGACTT CGCCAACGGC
GCGCAGGTCA TCATCGACCA GTTCATCTCG TCGGGCGAGG CGAAGTGGCT GCGCGTCAAC
GGCCTCGTGA TGCTGCTGCC GCACGGCTAT GAAGGGCAGG GACCCGAGCA CAGCTCGGCC
CGGCTGGAGC GCTATCTGCA GCTCTGCGCC GAGGACAATA TGCAGGTCGC CAACTGCACG
ACGCCGGCCA ATTATTACCA CATCCTGCGC CGGCAGATGG TCCGCCAGTT CCGCAAGCCG
CTGATCATCA TGACGCCGAA GTCGCTGCTC CGTCACAAGT CGGCGGTGTC GACGACCGAG
GAGATGCTGG GCGAAAGCCG GTTCCAGCGC GTCCTTCCCG ACCACAATCC GCCGGAGGAC
AAGGACGTCC GCCGGGTGGT GCTGGTCTCG GGCAAGCTCT TCTACGAGCT GGCCGAGGCG
CGCGACGCGG CCGGGGACGC CAACACGACG ATCCTGCGGC TCGAGCAGCT CTATCCCTTC
CCGGCCGATG CGCTGATCAC GCGCCTGGGC CGGATGCCCA ACCTCGAAAC CGTGGTCTGG
GCGCAGGAGG AGCCGAAGAA CCAGGGCGCC TGGACCTTCG TCGAGCCCTA TATCGAGAAG
GTCCTGACCG ACGTGGGCGG CACGCCGCGC CGCGCCGTCT ATGCCGGCCG CAAGGCCGCC
GCCGCGACGG CCACCGGCCT CGCCCGTAAC CACGCCGTCC AGCAGGCGGC ACTGATTGCC
GACGCGCTCG GCCACGAAGC GAAGGGTAAG TAA
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| Protein sequence | MGIEGVEFDG PEGVSASFVE SLYRQYRSDK SSVEPSWQDY FAGIEAGVSG PSWARTNWPP
TSTDALTAAL DPTQMEVPAK PAKAGGAPAP AVSAPAAGAT PAEVEQRALD SIRAIMLIRT
YRVRGHLLAN LDPLGLSQRE ETEDLTPAWH GFTEADMDRQ VYIAGFLGLD WATPREILAI
LRRNYCGNVG VEYMHIGDVE ERRFLQARME GKDAEISFTP EGKKAILNKV IHSEQWEKFL
GRKYVGTKRF GLDGGESMIP ALEAVIKYSG AYGVNEVVIG MAHRGRLNVL SNVMEKPYRA
IFNEFAGGSS NPEDVGGSGD VKYHLGTSTD REFDGNKVHL SLAPNPSHLE CVNPVVLGKS
RAKQTKLDDL ERSKVLPILL HGDAAFAGQG IIMECFGFSG LRGYNTGGTI HFVINNQVGF
TTSPQFARSS PYPSDIAKMV QAPILHVNGD DPEAVTFACK VATEFRQTFK RDVVIDMWCY
RRFGHNEGDE PGFTQPLMYE AIRKHPPVSA IYSARLVQEG VIDAEWTGKA EAEFVAHLET
EFEAGKGYKV NKADWFEGDW TGFAEPREAI TERRAAVTGI SAELFEDLGR QLTTVPEGLS
IHKTLNRILD AKKEMFASGA GFDWATAEAL AFGSLLRDGY GVRLSGQDSG RGTFSQRHAV
WVDQKDGHKY IPLSAMDRRF QVLDSPLSEF GVLGFEYGYA SAAPNTLVMW EAQFGDFANG
AQVIIDQFIS SGEAKWLRVN GLVMLLPHGY EGQGPEHSSA RLERYLQLCA EDNMQVANCT
TPANYYHILR RQMVRQFRKP LIIMTPKSLL RHKSAVSTTE EMLGESRFQR VLPDHNPPED
KDVRRVVLVS GKLFYELAEA RDAAGDANTT ILRLEQLYPF PADALITRLG RMPNLETVVW
AQEEPKNQGA WTFVEPYIEK VLTDVGGTPR RAVYAGRKAA AATATGLARN HAVQQAALIA
DALGHEAKGK
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