| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1297 |
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| Symbol | |
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| ID | 5200791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1449012 |
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| End bp | 1450262 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580844 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_001261800 |
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| Protein GI | 148554218 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.719825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG ATGTGGTGGT GCCGACGCTC GGCGAATCGA TCACCGAGGC GACGCTGGGC
CAGTGGCTCA AGAAGCCGGG CGAGGCCGTG AAGGCCGATG AGCCGATCGC CAGCCTGGAG
ACCGACAAGG TCTCGGTCGA AGTCCCGGCC CCGACCGCCG GCGTCATCGC CGAACTGGTC
GTCGGCGAGG GCGATACCGT CAATGTCGGC GCGGTGATCG CGCGGATCGA CGCGGGTGCG
ACGGCATCGA CCGCCGCGAC CCCGGCGGTC GAGGATCGCA ACGCGATCGG CCAGGCCGAG
GCGGCTGCCC CGGCGGAGCC GGCCGCTGCG CCGGTCGAGG ATGCGGGCGA CCCCGTCACC
CTGTCGCCGT CGGTCCGTCG CGCGGTGCTG GAGCATGGCG TCGACCCGTC GAAGATCAAG
GGCACCGGCA AGGACGGTCG CCTGACCAAG GACGACGTGA TCGCCGCGGC GAAGACCCAG
CCCAAGCCGG CCGCCGCAGC GGCGGCTCCG GCCGCGGCGC CGGTCGCCGC TGCCGCCGCC
CCGGCTGGCG AGCGCCGCGA GGAGCGGGTT CGCATGACCC GCCTGCGCCA GACCGTCGCG
AGCCGCCTCA AGGAGGCCCA GAACACCGCG GCGATCCTGA CCACCTTCAA CGACGTCGAC
ATGACGGCGG TGATCGAGGC GCGCAACAAG TACAAGGACC TGTTCGAGAA GAAGCACGGC
GTCCGCCTGG GCTTCATGGG CTTCTTCGTG AAGGCGGCCT GCATGGCGCT GCGTGACGTG
CCCGCGGTCA ACGCCTCGAT CGAGGGCGAC GAGATCGTCT ATCGCGACTA TGTCGACGTC
TCGGTCGCGG TGTCCGCCCC GAACGGCCTC GTCGTGCCGG TGATCCGCGA TGCGCAGGAC
CTGTCGGTCG CGGGGATCGA GAAGACGATC GGCGACTTCG GCGCCCGCGC CAAGGCCGGT
ACGCTCAAGC TCGAGGAGAT GAAGGGCGGC ACCTTCACCA TTTCGAACGG CGGCGTGTTC
GGCTCGCTGA TGTCGACTCC GATCATCAAT CCGCCGCAGG CCGGCGTGCT CGGCCTGCAC
CGGATCGAGG AGCGCCCGGT CGTCCGTGAC GGACAGATCG TCGCGCGGCC GATGATGTAC
CTCGCGCTCA GCTACGATCA CCGCCTGATC GACGGCCGCG AGGCGGTCAC CTTCCTCGTC
GCGATCAAGA ACGCGATCGA GGACCCGACC CGCCTGCTGA TCGACCTCTG A
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| Protein sequence | MATDVVVPTL GESITEATLG QWLKKPGEAV KADEPIASLE TDKVSVEVPA PTAGVIAELV
VGEGDTVNVG AVIARIDAGA TASTAATPAV EDRNAIGQAE AAAPAEPAAA PVEDAGDPVT
LSPSVRRAVL EHGVDPSKIK GTGKDGRLTK DDVIAAAKTQ PKPAAAAAAP AAAPVAAAAA
PAGERREERV RMTRLRQTVA SRLKEAQNTA AILTTFNDVD MTAVIEARNK YKDLFEKKHG
VRLGFMGFFV KAACMALRDV PAVNASIEGD EIVYRDYVDV SVAVSAPNGL VVPVIRDAQD
LSVAGIEKTI GDFGARAKAG TLKLEEMKGG TFTISNGGVF GSLMSTPIIN PPQAGVLGLH
RIEERPVVRD GQIVARPMMY LALSYDHRLI DGREAVTFLV AIKNAIEDPT RLLIDL
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