Gene Swit_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1293 
Symbol 
ID5197534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1446325 
End bp1446924 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID640580840 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_001261796 
Protein GI148554214 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.391883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG CCGCAGCTCC CGCCGCCGAG GCGCCCAAGA AGCCGGGCAA GATGAAGGGC 
ATCCTGGTGA TGCTCGTCGT CGCCCTCCTG TTCGCCGGCA TCGGTGTCGG AGCCGGGCTG
TACGCGGCCG GCGCCGGCCT CGCCGGCGGC CATGCGAAGC CCGCCGAGGA CCCCAACGCC
CCCAAGCTCG TCCCCAAGCC GGGCGCCGAG ACGGGCGGCC ATGGCGAGAA GAAGACCCTG
CCGATGGGCC TGGAGACCGA CGCGTCGCCC GATCCTACCA AGTACAAGGC GACCTTCTAC
ACCTTCGAGC AGCCCTTCAC CTCCAACCTG CGCGATTCGG ACGGCTTCTC GCAGGTCGGG
CTCGGCGTCT CGACCTATTA CGACCAGAAG GTGCTCGACA ACCTGAAGGA CAACGAGATG
CCGATCCGCT CGGCGATCCT GATGGTGATG GCGCAGCAGG ACAGCTTCAC CATCTCGACC
CCCGAGGGCA AGGTGAAGCT CCAGAAGGAC CTCAAGGCCG CGATCAACGA CGTGCTGCGC
CAGCGCACCG GCTTCGGCGG CATCGACAAC GTCTATTTCA CCAGCATGGT CGTCCAGTAG
 
Protein sequence
MSAAAAPAAE APKKPGKMKG ILVMLVVALL FAGIGVGAGL YAAGAGLAGG HAKPAEDPNA 
PKLVPKPGAE TGGHGEKKTL PMGLETDASP DPTKYKATFY TFEQPFTSNL RDSDGFSQVG
LGVSTYYDQK VLDNLKDNEM PIRSAILMVM AQQDSFTIST PEGKVKLQKD LKAAINDVLR
QRTGFGGIDN VYFTSMVVQ