Gene Swit_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1271 
Symbol 
ID5196147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1424981 
End bp1425328 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content65% 
IMG OID640580818 
Productflagellar basal-body rod protein FlgB 
Protein accessionYP_001261774 
Protein GI148554192 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.232017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC CGCTTTTCGG GATCCACGGC AAGGCACTGG AGCTGCGGTC GCAGCGCCTG 
TCGATGCTGG CGTCCAACAT CGCGAATGCC GCCACGCCCA ACTACAAGGC GCGCGACATC
GATTTCCAGA AGGCGCTGTC CGACGCGACC GACGGCATGT CGGCCGCGCA GGCCGCCGAC
GCCCATATCG GCTACCGCGT CCCGCTCGAA ACCTCGCTCG ACGGCAACAC CGTCGAGCTG
TCGACCGAGC AGAACCAGTT CGCCGAGAAC GCCCTGCGCT ACAAGACCAC GCTGTCCTTC
CTCGAAGGAC GGATCGGCAC GGTCATGCAG GCGCTGAAGG GAGAATAA
 
Protein sequence
MADPLFGIHG KALELRSQRL SMLASNIANA ATPNYKARDI DFQKALSDAT DGMSAAQAAD 
AHIGYRVPLE TSLDGNTVEL STEQNQFAEN ALRYKTTLSF LEGRIGTVMQ ALKGE