Gene Swit_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1261 
Symbol 
ID5198703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1416605 
End bp1417462 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID640580808 
Productflagellin domain-containing protein 
Protein accessionYP_001261764 
Protein GI148554182 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0424073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.51909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCG CGACCCGCTA CAGCGCCATT GCGCAAATCA ACCGCCAGGC GAAGCTCGGC 
GAGGAGATTG CCCGCACCCA GACCGAGATA TCGACCGGCA AGAAGGTGCA GACGGCGTCC
GACGATCCGA TCTCGGCCGC CCGCATCGCC GAGCTGCGCC GCGTGCAGGC CGACCAGGTC
ACCTGGTCGC GCAACATCCA GACTGCGCAG TCGGTCGCCG CGCAGGTCGA CACGCAGATG
GGCAACATGG CCGACATCTT CAATCGCGTG AAGGAACTGA CGCTGGCCGG GCGGTCGGAT
TCGGCATCGG CCGCCGATCG CGCGGCGATG GTGCAGGAAC TGCAATCGCT GCGCACCGCG
CTCAGCAACA TCGCCACCAC GAGCACGCCG ACCGGCCAGG CGCTGTTCCC GACCGACGCC
CCGCTCCAGA TATCGGTGTC GTCGACGGTG CGGCTGGCGG CGACCGCGCA GCGGTCGACC
GTGTTCGACG GCCTCGCCTA TACCCATGGC ACCGGCAGCC TCGACGATGC GATCGGGACC
GCGATCGACG CGATCTCGAC CGACGACGCC ACCGCGCGCC GCGCCGCTGC CGACGTCGCG
CTGTCGGACA TCGACGTGGC GGTCCAGCGC GTCACCGATC AGCGCGCCGC CCAAGGCGTC
CGCGCCCAGC AGCTCGACGT CGCGGCCGAC ACGCTCGAAG GCGTCTCGAC CCAACTCTCC
GAGGAGCGCA GCTCGCTCGA GGACACCGAC GTCGCGGCGG CGATCATGAA GCTCAACGCC
AAGACCCTGA CGCTGCAGGC CGCGCAGGCC GCCTTCGCCA AGGTCAACAG CAACACTTTA
TTCGATTTCC TGCGCTAG
 
Protein sequence
MISATRYSAI AQINRQAKLG EEIARTQTEI STGKKVQTAS DDPISAARIA ELRRVQADQV 
TWSRNIQTAQ SVAAQVDTQM GNMADIFNRV KELTLAGRSD SASAADRAAM VQELQSLRTA
LSNIATTSTP TGQALFPTDA PLQISVSSTV RLAATAQRST VFDGLAYTHG TGSLDDAIGT
AIDAISTDDA TARRAAADVA LSDIDVAVQR VTDQRAAQGV RAQQLDVAAD TLEGVSTQLS
EERSSLEDTD VAAAIMKLNA KTLTLQAAQA AFAKVNSNTL FDFLR