Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1261 |
Symbol | |
ID | 5198703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1416605 |
End bp | 1417462 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580808 |
Product | flagellin domain-containing protein |
Protein accession | YP_001261764 |
Protein GI | 148554182 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0424073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.51909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTCCG CGACCCGCTA CAGCGCCATT GCGCAAATCA ACCGCCAGGC GAAGCTCGGC GAGGAGATTG CCCGCACCCA GACCGAGATA TCGACCGGCA AGAAGGTGCA GACGGCGTCC GACGATCCGA TCTCGGCCGC CCGCATCGCC GAGCTGCGCC GCGTGCAGGC CGACCAGGTC ACCTGGTCGC GCAACATCCA GACTGCGCAG TCGGTCGCCG CGCAGGTCGA CACGCAGATG GGCAACATGG CCGACATCTT CAATCGCGTG AAGGAACTGA CGCTGGCCGG GCGGTCGGAT TCGGCATCGG CCGCCGATCG CGCGGCGATG GTGCAGGAAC TGCAATCGCT GCGCACCGCG CTCAGCAACA TCGCCACCAC GAGCACGCCG ACCGGCCAGG CGCTGTTCCC GACCGACGCC CCGCTCCAGA TATCGGTGTC GTCGACGGTG CGGCTGGCGG CGACCGCGCA GCGGTCGACC GTGTTCGACG GCCTCGCCTA TACCCATGGC ACCGGCAGCC TCGACGATGC GATCGGGACC GCGATCGACG CGATCTCGAC CGACGACGCC ACCGCGCGCC GCGCCGCTGC CGACGTCGCG CTGTCGGACA TCGACGTGGC GGTCCAGCGC GTCACCGATC AGCGCGCCGC CCAAGGCGTC CGCGCCCAGC AGCTCGACGT CGCGGCCGAC ACGCTCGAAG GCGTCTCGAC CCAACTCTCC GAGGAGCGCA GCTCGCTCGA GGACACCGAC GTCGCGGCGG CGATCATGAA GCTCAACGCC AAGACCCTGA CGCTGCAGGC CGCGCAGGCC GCCTTCGCCA AGGTCAACAG CAACACTTTA TTCGATTTCC TGCGCTAG
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Protein sequence | MISATRYSAI AQINRQAKLG EEIARTQTEI STGKKVQTAS DDPISAARIA ELRRVQADQV TWSRNIQTAQ SVAAQVDTQM GNMADIFNRV KELTLAGRSD SASAADRAAM VQELQSLRTA LSNIATTSTP TGQALFPTDA PLQISVSSTV RLAATAQRST VFDGLAYTHG TGSLDDAIGT AIDAISTDDA TARRAAADVA LSDIDVAVQR VTDQRAAQGV RAQQLDVAAD TLEGVSTQLS EERSSLEDTD VAAAIMKLNA KTLTLQAAQA AFAKVNSNTL FDFLR
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