Gene Swit_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1260 
Symbol 
ID5198702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1415632 
End bp1416495 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID640580807 
Productflagellar motor protein MotA 
Protein accessionYP_001261763 
Protein GI148554181 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0894303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.516828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCTG GCATCGGCCT GGTCATTCTC TTCGCCATGG TGTTCGGGGG ATTCGCCTTC 
ACCGGCGGCG ACCTGGAGCC CGTGCTGCAT GCCATCCCGC ACGAAATGCT GATCATCGGC
GGCGCCGCGC TCGGCGCGGT CGTGGCCGGC AATTCGATGA AGGAGCTCAA GGCGCTCGGC
GGCGGCTTCG CCAAGGTCTT CAAGGGACCG AAATATGGCA AGAAGGACTA TCTCGACGTC
ATCTTCCTCG TCTCGACGCT GATGAAGAAG CTGCGCACCG AGGGGCCCGT CGCGCTCGAA
CCGCATATCG AGGACCCCAA GGGATCGACG CTGTTCGCCG AATATCCCAA GCTGCTCAAG
GACGACACGC TGATCCACAT GATCACCGAC ACGCTGCGTC TGGTGGTCAT CTCCTCGGGC
ACGCTCGATC CGATGGCGGT CGAGGACGTC ATGGACAATG CGCTGAAGAC GCACCACCAT
GACGAGATCA AGCCCGCCGA CGCGATGCAG AACCTCGCCG ACTCGCTGCC CGCGCTCGGC
ATCGTCGCGG CCGTGCTCGG CGTGGTGAAG ACGATGGGCT CGATCGACAA GCCGCCGGCG
ATCCTCGGCG CGATGATCGG TTCGGCGCTG GTCGGCACCT TCCTCGGCGT GTTGCTCGCT
TATGGCATCG TCGGCCCCTT CGCCGGCCGC TGCCGCCAGG TGATCGAGGC CGACGGCGCC
ATCTATGGCG TGGTCAAGCA GATCATCATC GCCTCGCTGC ACGGCCACCC GCTGCCGCTG
GTGATCGAGG CCGCCCGCTC GGGCATCACC CATGTCAACC AGCCCGCCTT CGCCGACGTG
TTCGACGGCA TGCGCGGCCG CTGA
 
Protein sequence
MFAGIGLVIL FAMVFGGFAF TGGDLEPVLH AIPHEMLIIG GAALGAVVAG NSMKELKALG 
GGFAKVFKGP KYGKKDYLDV IFLVSTLMKK LRTEGPVALE PHIEDPKGST LFAEYPKLLK
DDTLIHMITD TLRLVVISSG TLDPMAVEDV MDNALKTHHH DEIKPADAMQ NLADSLPALG
IVAAVLGVVK TMGSIDKPPA ILGAMIGSAL VGTFLGVLLA YGIVGPFAGR CRQVIEADGA
IYGVVKQIII ASLHGHPLPL VIEAARSGIT HVNQPAFADV FDGMRGR