| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1250 |
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| Symbol | dnaK |
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| ID | 5196437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1406246 |
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| End bp | 1408138 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580797 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_001261753 |
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| Protein GI | 148554171 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.25904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG TAATCGGTAT CGATCTGGGC ACCACCAACA GCTGCGTCGC CGTGATGGAA
GGCGGCAAGC CCAAGGTCAT CGAAAATGCG GAAGGCGCGC GGACCACGCC GTCGATCGTC
GCGTTCGCCA AGGATGGCGA GCGGCTGATC GGCCAGCCGG CGAAGCGTCA GGCCGTCACC
AACCCGGACA ACACCATCTT CGCGGTGAAG CGCCTGATCG GTCGTCGCTT CGACGATCCG
ATCACCCGCA AGGACACCGA GCTGGTCCCC TATCACATCG TGAAGGGCCC GAACGGCGAC
GCGTGGGTGC AGGCGGGCGG CGAGGATTAT TCGCCGTCGC AGATCTCGGC CTTCACGCTG
CAGAAGATGA AGGAGACCGC CGAGAGCTAT CTGGGCGAGA CCGTGACCCA GGCGGTGATC
ACCGTCCCCG CCTATTTCAA CGACGCCCAG CGCCAGGCGA CCAAGGACGC CGGCAAGATC
GCCGGCCTCG AGGTGCTGCG CATCATCAAC GAGCCGACGG CGGCGGCGCT CGCCTATGGC
CTCGAGAAGA ATGACGGCAA GACCATCGCG GTCTACGATC TCGGCGGCGG CACCTTCGAC
ATCTCGATCC TCGAGATCGG CGACGGCGTG TTCGAGGTGA AGTCGACCAA CGGCGACACC
TTCCTGGGCG GCGAGGACTT CGACGCCAAG CTGGTCGAGT TCTTCGCGGC CGACTTCCAG
AAGGCCGAGG GCATCGACCT GACCAAGGAC CGGCTCGCGC TGCAGCGGCT CAAGGAAGCC
GCCGAGAAGG CGAAGATCGA GCTGTCCTCG GCGCAGACCA CCGAGGTCAA CCTGCCGTTC
ATCACCGCCG ACGCGACCGG GCCGAAGCAC CTCGTCAAGT CGCTGACCCG CGCCGATCTG
GAGCGTCTGG TCGAGCCGCT GATCCAGCGC TCGATCGAGC CGGTCAAGAA GGCGCTGGCC
GATGCCGGCC TGAAGGCGGC CGACATCGAC GAGGTCGTCA TGGTCGGCGG CATGACCCGC
ATGCCCAAGG TCCGCGAGGT CGTGAAGAGC TATTTCGGCA AGGAGCCGCA CACCGGCGTC
AACCCCGATG AGGTGGTGGC GATGGGCGCG GCGATCCAGG CCGGCGTGCT CCAGGGCGAC
GTCAAGGACG TGCTGCTGCT CGACGTGACC CCGCTGTCGC TGGGCATCGA GACGCTGGGC
GGCGTGTTCA CCCGGATGAT CGACCGCAAC ACGACGATCC CGACCAAGAA GTCGCAGACC
TATTCGACGG CCGACGACAA CCAGAACGCC GTCACCATCC GGGTCTTCCA GGGCGAGCGT
GAAATGGCGG CCGACAACAA GATGCTGGGT CAGTTCGACC TGATCGGCAT CCCGCCGGCG
CCGCGCGGCG TGCCGCAGAT CGAGGTCACC TTCGACATCG ACGCCAACGG CATCGTCAAC
GTGTCCGCCA AGGACAAGGG CACCGGCAAG GAACAGCAGA TCAAGATCCA GGCCTCGGGC
GGCCTTTCGG ACGCCGACAT CGACGGCATG GTGAAGGACG CCGAGAAGTT CGCCGAGGAG
GACAAGAAGC GCCGTGCGGC GGCCGAGGCG AAGAACAATG CCGAGAGCCT GATCCACACG
ACCGAGCGCC AGCTCCAGGA GCATGGCGAC AAGGTCGACG GCGGCCTCAA GTCCGAGATC
GAGGCTGCGA TCGCCGACGC CAAGACCGCG GTCGAGGGCG GCGACGCCGA TGCGATGACC
GAGAAGGCCC AGGCGCTCGC CCAGGTCGCG ATGAAGCTCG GCCAGGCGAT CTACGAGAAG
GAGCAGGCGG CCGCCGCGGC TCCGGGCGAA GAGGCGCCGA AGGACGACGA CGTGGTCGAC
GCCGAATTCT CGGAAGTCGA CGACAAGAAG TAA
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| Protein sequence | MAKVIGIDLG TTNSCVAVME GGKPKVIENA EGARTTPSIV AFAKDGERLI GQPAKRQAVT
NPDNTIFAVK RLIGRRFDDP ITRKDTELVP YHIVKGPNGD AWVQAGGEDY SPSQISAFTL
QKMKETAESY LGETVTQAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG
LEKNDGKTIA VYDLGGGTFD ISILEIGDGV FEVKSTNGDT FLGGEDFDAK LVEFFAADFQ
KAEGIDLTKD RLALQRLKEA AEKAKIELSS AQTTEVNLPF ITADATGPKH LVKSLTRADL
ERLVEPLIQR SIEPVKKALA DAGLKAADID EVVMVGGMTR MPKVREVVKS YFGKEPHTGV
NPDEVVAMGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRMIDRN TTIPTKKSQT
YSTADDNQNA VTIRVFQGER EMAADNKMLG QFDLIGIPPA PRGVPQIEVT FDIDANGIVN
VSAKDKGTGK EQQIKIQASG GLSDADIDGM VKDAEKFAEE DKKRRAAAEA KNNAESLIHT
TERQLQEHGD KVDGGLKSEI EAAIADAKTA VEGGDADAMT EKAQALAQVA MKLGQAIYEK
EQAAAAAPGE EAPKDDDVVD AEFSEVDDKK
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