| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1249 |
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| Symbol | |
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| ID | 5196436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1404969 |
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| End bp | 1406111 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580796 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001261752 |
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| Protein GI | 148554170 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.38744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.199724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG ATATCGATTA TTACGAGCTG CTCGAGGTCG AGCGTACGGC CGACGACAAG
GTCCTCAAGA CGTCGTTCCG ACGGCTGGCG ATGCAGTATC ATCCGGATCG CAATCCCGGC
GATCATGCGG CCGAGGCGAA GTTCAAGGCG ATCAACGAGG CCTATGACTG CCTGAAGGAC
CCGCAGAAGC GCGCCGCCTA CGACCGGTTC GGCAAGGCGG CCTTCCAGAA TGGCGGGCCG
GGCGCCGGCG GTTTCGGCGG CGGCGGCTTC GAAGGCTTCT CCGACATCTT CGAGAATATC
TTCGGCGAGT TCATGGGCGG CGGCCGTGGC GGCGGCGGAC AGCGCTCCAG CGTGCGGCGC
GGCGCGGACC TGCGCTACGA TCTCGAGATC ACGCTGGAGG AGGCCTATGC CGGCAAGCAG
GCGTCGATCA CCGTCGACGT CGCGGCGCAG TGCGACACCT GCGACGGATC GGGCGCCAAG
CCCGGCACCG GCACCCAGCA TTGCAAGACC TGCGGCGGCC ACGGCAAGGT GCGCGCGCAG
CAGGGCTTCT TCGTGGTCGA GCGGACCTGT CCGTCGTGCC ACGGCGCGGG GCAGGTGATC
TCCGATCCCT GCGACGCCTG CCATGGCGAG GGCCGGATCG AGAAGACCAA GACGCTCGAC
GTCGGGGTCC CCGCCGGCGT CGACGAAGGC ACCCGTATCC GCCTGACCGG CGAGGGCGAG
GCCGGCGCGC GGGGTGGCCC GCCGGGCGAC CTCTACATCT TCATCCACCT GCGCGAGCAT
GGGATCTTCG AGCGCGACGG GACGACCCTG TTCGCCCGCG CGCCGATCAG CTTCACCACC
GCCGCGCTCG GCGGCACGAT CGAGGTGCCC GGCCTCGACA AGAAGCGCCA CGAGATCCGC
ATCCCCGCCG GCATCCAGTC GGGCAAGCAG ATCCGCCAGC GCGGCGCCGG CATGCCGGTG
CTCAACGGCC GCGGCCATGG CGACCTCGTC ATCCAGATCG ACGTCGAGAC CCCGACCCGC
CTTAGCGCGC GGCAGAAGGA GCTGCTCGAG GAATTCCGCT CGACCGAGAC CGGCGAGGAA
TGCCCCCAGT CGAGCGGTTT CTTCGCCCGC CTCAAGGGCA TGTGGGAAGA TCTGACGGAG
TAG
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| Protein sequence | MSTDIDYYEL LEVERTADDK VLKTSFRRLA MQYHPDRNPG DHAAEAKFKA INEAYDCLKD
PQKRAAYDRF GKAAFQNGGP GAGGFGGGGF EGFSDIFENI FGEFMGGGRG GGGQRSSVRR
GADLRYDLEI TLEEAYAGKQ ASITVDVAAQ CDTCDGSGAK PGTGTQHCKT CGGHGKVRAQ
QGFFVVERTC PSCHGAGQVI SDPCDACHGE GRIEKTKTLD VGVPAGVDEG TRIRLTGEGE
AGARGGPPGD LYIFIHLREH GIFERDGTTL FARAPISFTT AALGGTIEVP GLDKKRHEIR
IPAGIQSGKQ IRQRGAGMPV LNGRGHGDLV IQIDVETPTR LSARQKELLE EFRSTETGEE
CPQSSGFFAR LKGMWEDLTE
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