Gene Swit_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1238 
Symbol 
ID5196173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1394152 
End bp1394850 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID640580785 
Productglutamine amidotransferase 
Protein accessionYP_001261741 
Protein GI148554159 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0578431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCG CGCTCGTCAT CCGCCACGTC CCCTATGAAG GAATCGCCGG CTTCCGCGCG 
CCCGTGGAGG CGGCCGGCTA TGTCATCGAC CGGGTCGACG TCACCGATCC CGATTTCGCC
CAGGTCGACT TCGACACGCC CGACCTCGTC GTGATGATGG GCGGGCCGAT GGGCGTGTAC
GAGACCGATC GATATCCCTG GCTCGGCTGC GAGATCGCGC GGCTGGCGCG GCGGATCATG
CTCGACCGGC CGACCCTCGG TGTCTGCCTG GGCAGTCAGG TCATCGCCGC GGCGATGGGC
GCGCGCGTCT ATGCCGGGCC GGTCAAGGAG GTCGGCTTCG CGCCGGTGAC GATCCACGAC
GCGGGCCTCG CCTCGCCGCT GCGCCATATC GAGGGGGTGC CGGTGCTGCA TTGGCACGGC
GACACCTTCG ACCTGCCCGA GAGGGCCGAG CTGCTCGCCT CGTCCGACGC CTATCCGCAC
CAGGTGTTCC GGCGCGGCGA CAATATCCTG GCGCTCCAGT GCCATTCGGA GATGGGCGAG
GACCCGCGCT TCGACGCCTG GCTGGAGGAC GAGCCCTATA TCCACGCGGC GGGCCGGACG
GTCGAGGAGC TGCGCGGCGA GCATGATCGC CACGGTCCGG TCGCGGTGGC GGCGGGGCGC
AGGATGATCG CCGACTGGCT CGACCGGCTG GACCCGTAA
 
Protein sequence
MKSALVIRHV PYEGIAGFRA PVEAAGYVID RVDVTDPDFA QVDFDTPDLV VMMGGPMGVY 
ETDRYPWLGC EIARLARRIM LDRPTLGVCL GSQVIAAAMG ARVYAGPVKE VGFAPVTIHD
AGLASPLRHI EGVPVLHWHG DTFDLPERAE LLASSDAYPH QVFRRGDNIL ALQCHSEMGE
DPRFDAWLED EPYIHAAGRT VEELRGEHDR HGPVAVAAGR RMIADWLDRL DP