Gene Swit_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1233 
Symbol 
ID5200950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1389297 
End bp1389728 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID640580780 
Producthypothetical protein 
Protein accessionYP_001261736 
Protein GI148554154 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.258606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.166561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGG CAATATTGAC GGTGCTGGGG CTGGCGATCA TGGCGCAGCC GGCCTGGGCC 
GAGATCGGCC GGATCAAGCG CAGCGTCGGC GCGACCACGG TCGAGCGCGG CAAGGCGAAG
CTCACCCCCG CGCCCGGCTT CCAGCTCCTT CCCGGCGACA CGCTGGTCAC CGGCAAGGAC
GGGCAGATGA GCCTGACCTT CATCGACGAC ACCCGTTTCT CGGTGGGGCC GAACAGCCGC
ATCGCGGTCG ACGACTTCAA CTATGACCGC ACCGCCCAGA CCGGCAGCTT CGTGACCCGT
GTCAATCGCG GCTCGCTCGC GGTCGTGTCG GGGCAGATCG CCAAGTCGAA GCCCGACGCG
ATGAAGGTCC GCACCCCGAC CTCGCTGCTC GGCGTGCGCG GCACCCGCTT CATCGTCGAG
GTCTCCAAAT GA
 
Protein sequence
MRRAILTVLG LAIMAQPAWA EIGRIKRSVG ATTVERGKAK LTPAPGFQLL PGDTLVTGKD 
GQMSLTFIDD TRFSVGPNSR IAVDDFNYDR TAQTGSFVTR VNRGSLAVVS GQIAKSKPDA
MKVRTPTSLL GVRGTRFIVE VSK