| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1230 |
|---|
| Symbol | |
|---|
| ID | 5197470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1386665 |
|---|
| End bp | 1387720 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640580777 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001261733 |
|---|
| Protein GI | 148554151 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.369365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.219943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACAG CCGCGGAACT GGCGGACGCG CTGGTTCGAG TGATCCAGGC CAATGGGCCG
ATCCCGGTCG CCGACTATAT GGAGGCGGCC AACGGCCTCT ATTATGCCGC GCACGACCCG
TTCGGCGTGA AAGGCGATTT CATCACCTCG CCCGAGATCA GCCAGATGTT CGGCGAGCTG
ATCGGCATCT GGATCGCCGA TCTCTGGACC CGCTCGCGCG CGCTCGGCGC CTATTATGTC
GAACTGGGGC CGGGGCGGGG GACGCTCGCC GCCGACGCGC TGCGGGCGAT GGGGGCGCTG
CGCCGCCATC CGGAGGTGCA TTTCGTCGAG ACCAGCCCGG TGCTGCGACG GCTCCAGAAG
GAGAGGGTGC CCGACGCCGT CTGGCACGAG GGGATCGAGA CGCTGCCGAC CGACGCGCCA
CTGATCATCG TCGCCAACGA ATTCTTCGAC GCGCTGCCCT ATCGCCAATA TATCAAGACC
TATAGCGGCT GGCGCGAGCG GGTCGTCACC CATGACGCCG ACGGCTTCCG CCCGGTGCCG
GGCGATGCCC CGGCCGAGGA TGTCGTCCCC GAGCATCTCC ACGACGCGGT CGCGGGCAGC
ATCTACGAGA CCTCCCCGGC GGGTCTCGCC GTCGCCCGCG CGCTGGCGGC GCGGATCGTC
AAGCAGGGCG GGGCATTGCT CGCGATCGAC TATGGGCATG AGAATTATGC GGCGGGCGAC
ACGCTGCAGG CGCTCAACGC CCATGCCTAT GCCGACGTGT TCAGCAATCC CGGCGCCAAC
GACATCACCG CCCATGTCGA CTTCACCGCG CTGGGCGAGG CCGGCCGGTT GGGCGGCGCG
CGGATCGAGG GGCCGGTGTC GCAGAGTTAT TTCCTGGCGA CGCTCGGCAT CGCCGCCCGT
GCCGCGGCGC TATCCCGCCA CCATCCCGAT CGCACCGAGG AGATCGGCGC CGCCTATCAC
CGGCTGACGT CGGAGGAGGA GATGGGCACC CTGTTCCGCG CCATCGCGAT GGTCAGCCCG
AAATGGCCGA AGCCCGCCGG GTTCGAGGTC GGCTGA
|
|---|
| Protein sequence | METAAELADA LVRVIQANGP IPVADYMEAA NGLYYAAHDP FGVKGDFITS PEISQMFGEL
IGIWIADLWT RSRALGAYYV ELGPGRGTLA ADALRAMGAL RRHPEVHFVE TSPVLRRLQK
ERVPDAVWHE GIETLPTDAP LIIVANEFFD ALPYRQYIKT YSGWRERVVT HDADGFRPVP
GDAPAEDVVP EHLHDAVAGS IYETSPAGLA VARALAARIV KQGGALLAID YGHENYAAGD
TLQALNAHAY ADVFSNPGAN DITAHVDFTA LGEAGRLGGA RIEGPVSQSY FLATLGIAAR
AAALSRHHPD RTEEIGAAYH RLTSEEEMGT LFRAIAMVSP KWPKPAGFEV G
|
|---|
| |