| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1224 |
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| Symbol | |
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| ID | 5196261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1381741 |
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| End bp | 1382871 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580771 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001261727 |
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| Protein GI | 148554145 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.42946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.749975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGAAAC CAGCACAGCC ACGCGCAGCG GCCAAAAAGG CCGCGCCGCG CAAACCCGCA
TCTCCAAGGG CGAAAGCCGC CGCGCCGAAA CCGGCCGCTG CCGCCGCCAC CACCGCGCCG
CCGATATCCA ACCGCGAACG CCCTGCCGAA CCGCAGCGGT ACAAGGCGAG CAAGGAGGAG
ATGCTGGAGT TCTACCGGCA GATGCTGCTG ATCCGCCGCT TCGAGGAGAA GGCGGGCCAG
CTCTACGGCC TCGGCCTGAT CGGCGGTTTC TGCCACCTCT ATATCGGCCA GGAGGCCGTC
GCGGTCGGCC TGCAGTCGGC GCTCGAGGTG GGCAAGGATT CGGTGATCAC CGGCTATCGC
GACCATGGCC ACATGCTGGC CTATGGCATC GACCCGAAGC TGATCATGGC CGAGCTCACC
GGCCGCGCCG CCGGCATCAG CCGCGGCAAG GGCGGATCGA TGCACATGTT CTCGGTCGAC
CACCGCTTCT ACGGCGGCCA CGGCATCGTC GGCGCGCAGG TCAGCCTCGG CACCGGCCTG
GCCTTCAAGC ATAAATATGC GGGCGACGGC GGCGTCGCCA TGGCCTATTT CGGCGACGGC
GCGTCGAACC AGGGCCAGGT CTACGAGAGC TTCAACATGG CCGAGCTGTG GAAGCTCCCG
ATCATCTTCG TGATCGAGAA CAACCAGTAC GCCATGGGCA CCAGCGTCAA CCGTTCCTCG
GCCGAGGACC AGCTCTACCG CCGCGGCGAG AGCTTCCGCA TCCCCGGCAT CCAGGTCGAC
GGCATGGACG TGCTGGCGGT GCGCGGCGCC GCCGAGGAGG CGGTCGCCTG GGTCCGCGCC
GGCAAGGGGC CGATCCTGCT CGAACTCAAG ACCTATCGCT ATCGCGGCCA TTCGATGTCC
GACCCGGCCA AGTACCGCTC GCGCGACGAG GTCCAGTCGG TGCGCGAGAA GTCCGACCCG
ATCGACCATC TCAAGAAGGA GCTGGAAGCG GCGGGCGTCG GCGAGGACGA GCTGCGCACG
CTGGAGAAGG ACATCCGCGC GATCGTGACC GAGGCGGCCG ACTTCGCCGA ACAGTCGCCC
GAACCCGAGC CCGAAGAGCT CTATACCGAC GTGCTGGTGG GACAATATTG A
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| Protein sequence | MAKPAQPRAA AKKAAPRKPA SPRAKAAAPK PAAAAATTAP PISNRERPAE PQRYKASKEE
MLEFYRQMLL IRRFEEKAGQ LYGLGLIGGF CHLYIGQEAV AVGLQSALEV GKDSVITGYR
DHGHMLAYGI DPKLIMAELT GRAAGISRGK GGSMHMFSVD HRFYGGHGIV GAQVSLGTGL
AFKHKYAGDG GVAMAYFGDG ASNQGQVYES FNMAELWKLP IIFVIENNQY AMGTSVNRSS
AEDQLYRRGE SFRIPGIQVD GMDVLAVRGA AEEAVAWVRA GKGPILLELK TYRYRGHSMS
DPAKYRSRDE VQSVREKSDP IDHLKKELEA AGVGEDELRT LEKDIRAIVT EAADFAEQSP
EPEPEELYTD VLVGQY
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