| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1220 |
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| Symbol | |
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| ID | 5199664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1379898 |
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| End bp | 1380596 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580768 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_001261724 |
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| Protein GI | 148554142 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.58979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCCGA TCGCCGAACC GCCCGCCGAC TGCGCCCTGT GCCCCCGGCT GGCCGCCTAT
CGGGCGACGC AGCGGATCGA AAATCCGAGC TGGTTCAATG CGCCGGTGCC GACCTTCGGG
GATTCCGGCG CCCGGCTCGT CATCGTCGGG CTCGCACCGG GACTGAAGGG CGCGAACCGC
ACCGGACGCG CCTTCACCGG CGATGGATCG GGCACGATGC TGTTCGACGT GCTGGCCGAT
CACGGCCTGG CGCGGGGCGG CTATGGCCAT GATGCCGACG ACGGTCTCCG CCTCGACGGC
ACGGTCATCG TCAATGCGGT GCGCTGCGTG CCCCCCGCCA ACCGGCCGAC CCCGGCCGAG
GTCCGTGCCT GCCGCCCCTT CCTGGCCGGT CCGCTGAACG GCGCCCCGGC GCCGCGGGTG
ATCGTCGCGC TCGGCCGCAT CGCCCATGAC GCGACCCTGG CCGCGCTCGG CGAGACGCCC
GCCCGCTTTC GTTTCGCCCA TGGCGCCGAA CACCGGCCGG AAGGGTCGAT CCTGATCGAC
AGCTACCACT GCTCGCGGTA CAATCAGAAT ACCGGACGAC TTACCTACAA GATGTTGTGG
TCGATCTTCG AGAAGGCCAT TCGTTACGCG TCCGAATCAC CTTTCCAATC ACCAGAAAAT
ATCGGTAATT CAGCGCCCAA AGCGCGCGAA AGGACTTGA
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| Protein sequence | MEPIAEPPAD CALCPRLAAY RATQRIENPS WFNAPVPTFG DSGARLVIVG LAPGLKGANR
TGRAFTGDGS GTMLFDVLAD HGLARGGYGH DADDGLRLDG TVIVNAVRCV PPANRPTPAE
VRACRPFLAG PLNGAPAPRV IVALGRIAHD ATLAALGETP ARFRFAHGAE HRPEGSILID
SYHCSRYNQN TGRLTYKMLW SIFEKAIRYA SESPFQSPEN IGNSAPKARE RT
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