Gene Swit_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1210 
Symbol 
ID5197735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1369343 
End bp1370260 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID640580757 
Productcysteine synthase 
Protein accessionYP_001261714 
Protein GI148554132 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.473529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.609276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT ACGCATCGAT ATTGGAGACG ATCGGCGGGA CGCCGCATGT GCGCGTCAAC 
CGTCTGTTCG GCGACGCCGA GGTGTGGATC AAGTCGGAAC GCAACAATCC GGGCGGATCG
ATCAAGGACC GCATCGCGCT GGCGATGATC GAGGATGCCG AGCGTTCGGG CAAGCTCAAG
GCCGGCGGCA CGATCATCGA GCCGACCAGC GGCAACACCG GCATCGGCCT GGCGCTGGTC
GCGGCGGTCA AGGGCTACAA GCTGATCCTC GTCATGCCGG AGAGCATGTC GGTCGAGCGG
CGCCGGCTGA TGCTCGCCTA TGGCGCGACC TTCGACCTCA CCCCGCGCGA GCGGGGCATG
AAGGGCGCGA TCGAGCGGGC GCTGGAACTG CAGGCGCAGA CGCCGGGCGC ATGGATTCCG
CAGCAGTTCG AGAATCCGGC GAACATCGAC GTCCATGTCC GCACCACTGC GGAAGAGATC
TACGCCGACT TCAAGGATGC TCCGATCGAC GTGCTGATCA CCGGCGTCGG CACCGGCGGC
CACATCACCG GCGTCGCGCA GGTGCTCAAG CCGCGCTGGC CGGACCTCAA GGTGTTCGCG
GTCGAGCCGA CGCTGTCGCC GGTCATCTCG GGCGGCCAGC CCGGCCCGCA CCCGATCCAG
GGCCTCGGCG CGGGCTTCAT CCCCGCCAAC CTCCACACCC AGCTGCTCGA CGGCGCGATC
CAGGTCGACG CAGGCGACGC CAAGGACTAT GCCCGCCGCT CGGCGCGCGA GGAGGGGATG
CTCGTCGGCA TCAGCTCGGG CGCGACCCTC GCGGCGATCG CCCAGAAGCT CCCCGAATTC
GCGGGCAAGC GCTTCCTCGG CTTCAACTAC GACACCGGCG AGCGCTATCT CTCGGTGCCG
GATTTCCTGC CGGAGTGA
 
Protein sequence
MTKYASILET IGGTPHVRVN RLFGDAEVWI KSERNNPGGS IKDRIALAMI EDAERSGKLK 
AGGTIIEPTS GNTGIGLALV AAVKGYKLIL VMPESMSVER RRLMLAYGAT FDLTPRERGM
KGAIERALEL QAQTPGAWIP QQFENPANID VHVRTTAEEI YADFKDAPID VLITGVGTGG
HITGVAQVLK PRWPDLKVFA VEPTLSPVIS GGQPGPHPIQ GLGAGFIPAN LHTQLLDGAI
QVDAGDAKDY ARRSAREEGM LVGISSGATL AAIAQKLPEF AGKRFLGFNY DTGERYLSVP
DFLPE