Gene Swit_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1206 
Symbol 
ID5197731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1365375 
End bp1366640 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID640580753 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001261710 
Protein GI148554128 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.350362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.678051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAGC GCCTCACTTA CTATATCCTC GGCGCGATGA TCGCCGGCAT CGTCGTCGGC 
ATCACGCTCA ACCGGACGAT CACCGATCCC GCCACCCTGA CCGACGTCAC CGGCCATATC
TCGATCCTCA CCGAGCTGTT CCTGCGGCTG ATCAAGATGA TCATCGCGCC GCTGGTGTTC
GCGACGCTCG TCACCGGCAT CGCCCATATG GGCGACACCG CCGCGCTCGG CCGGGTCGGC
TTCCGCTCGA TCGCCTGGTT CCTGACCGCC AGCCTGATGT CGCTGACCCT CGGCCTGATC
ATGGTCAACC TGCTCCAGCC CGGCGTCGGC GCCGATCTGG TGCTGCCGCC CGAGGGCGCG
TCGGCGGGTG TCTCGCAGGC CGATTTCTCG CTGAAGCAGT TCGTCACCCA TCTCGTGCCC
AAGAGCTTCT TCGAGGCGAT GGCGACCAAC GAGATCCTCC AGATCGTCGT CTTCTCGGTG
TTCACCGGGG TCGCGATCAC CGCGGTCGGC GAGCGCGCTG CGCCGCTGGT GCGCGGCATC
GAGGCGCTGG TGCAGGTGAT GCTCCAGATC ACCGACTATG TGATGCGCTT CGCCCCCTTC
GCGGTGTTCG CCGCGGTCAC CACCGCGCTC GCCGAGCAGG GGCCCGGCAT CCTGCTCAGC
TTCGGCAAGT TCATGGGCAG CTTCTATCTG TCGATGTTCC TGCTGTGGGG CTTGCTGCTG
CTGCTCTGCT ACCTGATCGT CGGCGGCCGA TCGAAGCTGC TGATCCGCTA TATCCGCGAG
CCGATCCTGC TGGCGTTCAG CACCGCCTCC TCCGAAGCGG CCTTCCCGCG CACGCTGGAG
GCGCTCGACC GGTTCGGCGT GCCGCCGCGC ATCGCCAGCT TCGTGCTGCC GCTCGGCTAT
TCGTTCAACC TCGACGGCTC GATGATCTAC TGCACCTTCG CGACGATGTT CATCGCGCAG
GCCTATGGGA TCGAGCTGAC CTTCGCGCAC CAGGTGACGA TGCTGCTGAT CCTGATGGTG
ACGTCGAAGG GGATCGCCGG CGTGCCGCGC GCCAGCCTGG TGATCATCTC GTCGACCCTG
GCCTTCTTCG ACATTCCCGA GGCCGGCCTG CTGCTGATCC TCGCGGTCGA CCATTTCCTC
GACATGGGCC GCTCGGCCAC CAACGTCGTC GGCAATGCGG TGGCGAGCGT GATCGTCGCG
AAATGGGAAG GCGGGCGGCT GGACGAGATC GAGCCCGCCG AGATCGAGCC GCGCCACGCG
CCATAG
 
Protein sequence
MAKRLTYYIL GAMIAGIVVG ITLNRTITDP ATLTDVTGHI SILTELFLRL IKMIIAPLVF 
ATLVTGIAHM GDTAALGRVG FRSIAWFLTA SLMSLTLGLI MVNLLQPGVG ADLVLPPEGA
SAGVSQADFS LKQFVTHLVP KSFFEAMATN EILQIVVFSV FTGVAITAVG ERAAPLVRGI
EALVQVMLQI TDYVMRFAPF AVFAAVTTAL AEQGPGILLS FGKFMGSFYL SMFLLWGLLL
LLCYLIVGGR SKLLIRYIRE PILLAFSTAS SEAAFPRTLE ALDRFGVPPR IASFVLPLGY
SFNLDGSMIY CTFATMFIAQ AYGIELTFAH QVTMLLILMV TSKGIAGVPR ASLVIISSTL
AFFDIPEAGL LLILAVDHFL DMGRSATNVV GNAVASVIVA KWEGGRLDEI EPAEIEPRHA
P