| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1201 |
|---|
| Symbol | |
|---|
| ID | 5200246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1360574 |
|---|
| End bp | 1361851 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640580748 |
|---|
| Product | UDP-glucose/GDP-mannose dehydrogenase |
|---|
| Protein accession | YP_001261705 |
|---|
| Protein GI | 148554123 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.20693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTTG AACGAGGAAC GAGCCGGATC GCGGTGATCG GTCTGGGATA TGTCGGCCTG
CCGCTGGCGG TGGCGCTGGC GAAGCATTTT CCGACCGTCG GCATCGATAT CGACCAGGGC
CGCGTCGACG AGCTGAAGCG CGGCCATGAC CGGACCAACG AGCTGACCGC CGAGGCGCTC
GCCGCCTCGA CGCTGGCGCT GACCACGGCC ATCGGCGAGG CGGCCGACGC CGACGTCGTC
ATCGTCACCG TGCCGACCCC GGTCGACCAT GCCAACCGCC CCGATCTCGG CCCGGTCATG
TCGGCGACCC GCAGCGTCGC GTCGGTGCTG AAACCCGGCC GGGGGACGAT CATCGTCTAT
GAGAGCACCG TCTATCCGGG CGTGACCGAG GACCTGTGCG GGCCCGAGCT GGAGAAGCTG
TCGGGCCTCA GGCGCGGCAC CGACTTCTTC CTCGGCTACA GCCCCGAGCG GATCAACCCG
GGCGACCGTG AGCATACCGT CGATCGCATC ACCAAGGTGG TGGCGGGCGA GAATCCGGAG
GTGCTCGACA AGCTCTGCGC GATCTATGGC GCGGTCACGA CCGGCGGCAC CTTCCGCGCC
GCGTCGATCA AGGTGGCCGA GGCGGCGAAG GTGATCGAGA ACGCCCAGCG CGACATCAAC
ATCGCCTTCG TCAACGAGAT CACCCAGATC TTCGGCAAGG TCGGCATCTC GATCTGGGAC
GTGCTGGCGG CGGCGGGGAC AAAGTGGAAC TTCCTGCGCT TCGTGCCGGG GCTGGTCGGC
GGCCACTGCA TCGGCGTCGA CCCTTATTAT CTCAGCTATC TCGCCCAGCA GCTCGGTCAT
GATCCGCGCG TCATCCTGGC GGGGCGCGGC ACGAACGACG GCATGGGCGC CTGGATCGCC
GACCAGATCC ACGAACGGAT CGCCAGCGGA TCGCGCGTCC TGATGCTCGG GCTGACCTTC
AAGGAGAATG TCCCCGACCT GCGCAATTCG CGGGTGATCG ACGTCGTCCG CCGGCTCGAA
TGGCTGCGGC ACGAGGTGGT GATCCACGAT CCGCTCGCCG ACCCGGCCGA GGCGCGCCAC
GAATATGGCG TCGACCTCGC CGCCGACGCG CTCGACGGGC GCTATGACGT GGTGATCGGC
GCGGTCTCGC ACGGCGACTA TGCCGCGCTG CCGGCCGACC GGCTCGCCGC GCTGGTCAAG
CCGGACGGGC TGGTCGCCGA TCTCAAGGGC ATGTGGGGCG GGCTCGACCT GCCCGGCGTC
CGCCGCTGGA CGCTCTGA
|
|---|
| Protein sequence | MSVERGTSRI AVIGLGYVGL PLAVALAKHF PTVGIDIDQG RVDELKRGHD RTNELTAEAL
AASTLALTTA IGEAADADVV IVTVPTPVDH ANRPDLGPVM SATRSVASVL KPGRGTIIVY
ESTVYPGVTE DLCGPELEKL SGLRRGTDFF LGYSPERINP GDREHTVDRI TKVVAGENPE
VLDKLCAIYG AVTTGGTFRA ASIKVAEAAK VIENAQRDIN IAFVNEITQI FGKVGISIWD
VLAAAGTKWN FLRFVPGLVG GHCIGVDPYY LSYLAQQLGH DPRVILAGRG TNDGMGAWIA
DQIHERIASG SRVLMLGLTF KENVPDLRNS RVIDVVRRLE WLRHEVVIHD PLADPAEARH
EYGVDLAADA LDGRYDVVIG AVSHGDYAAL PADRLAALVK PDGLVADLKG MWGGLDLPGV
RRWTL
|
|---|
| |