Gene Swit_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1190 
Symbol 
ID5197337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1351926 
End bp1352270 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content68% 
IMG OID640580737 
ProductArsR family transcriptional regulator 
Protein accessionYP_001261694 
Protein GI148554112 
COG category[K] Transcription 
COG ID[COG1777] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.417891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATGG AAGATTCGCT GAGTCTCAAG CTGGCGGCGC TCGCCGACCC CACGCGCCGC 
GCGATCGTCG CCCGGCTCGC GCGCGGGGAA GCGAGCGTGT CCGAACTGCA AAGGCCGTTC
GGCATCAGCC AGCCGGCGAT CTCCAAGCAT CTCAAGGTCC TCGAACGGGC CGGGCTGATC
GAACAGGGCC GCATCGGCCA GTCGCGCCCG CGTCGCCTGC GGGTCGATGC GCTGCGCGCG
ACCGGGGCCT GGTTCGATCA GGTCGCCGAC CTCTGGCGCG ACAGCTTCGA CCGGCTCGAT
ACGCTGCTGA TGGAAACGGA GAATGACGAT GTCGAATCCC GATGA
 
Protein sequence
MAMEDSLSLK LAALADPTRR AIVARLARGE ASVSELQRPF GISQPAISKH LKVLERAGLI 
EQGRIGQSRP RRLRVDALRA TGAWFDQVAD LWRDSFDRLD TLLMETENDD VESR