Gene Swit_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1189 
Symbol 
ID5197336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1351445 
End bp1351942 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID640580736 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001261693 
Protein GI148554111 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.437903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC CCGATGAATT CGTGATGTCC CGCCTCTTCA AGGCGCCCCG CGACCGCGTC 
TGGGCCGCCT GGACGCGGCC CGAGCAGCTT GCCCGATGGT TCGGCCCCAG GGGCGTGACC
ACCACCGTGG TGGCGGCCGA CATCCGGCCG GGCGGCTTCT TCCATTGCCG GATGGACATG
GCCGATGGCG GCGGCACGCT CTGGGCCAGG CTCGTCTATC GCGAGATCGC GGCGCCGGAG
CGGATCGTCT GGGAGCACAG CTTCGCCGAT CGCGACGGCA ATATCGTCGG CTCGCCTTTC
TCCGAGCATT GGCCGAAGCG CCTGCTGACG ACGGTGTTGT TCGAGGAGGC CGGCGCCGAC
ACCCGCGTCC GCCTGAGCTG GGTGCCGATC GACGCGAGCG CGGAGGAACT GCGCGAATAT
CGCGATGCGA TCCCTTCCTT CGACGACGGC TGGGCCGGCA GCTACGAGGC GCTCGACCGG
TTGCTGGCGC AGGACTGA
 
Protein sequence
MSNPDEFVMS RLFKAPRDRV WAAWTRPEQL ARWFGPRGVT TTVVAADIRP GGFFHCRMDM 
ADGGGTLWAR LVYREIAAPE RIVWEHSFAD RDGNIVGSPF SEHWPKRLLT TVLFEEAGAD
TRVRLSWVPI DASAEELREY RDAIPSFDDG WAGSYEALDR LLAQD