Gene Swit_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1188 
Symbol 
ID5197335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1350345 
End bp1351481 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content77% 
IMG OID640580735 
Productmonooxygenase, FAD-binding 
Protein accessionYP_001261692 
Protein GI148554110 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.718731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAA CGGCTGCGCT GATCGCGGGC GGCGGACCGG CAGGGGCCGC CGCCGCCATC 
CTCCTCGCCC ATGGCGGGGC GATGCCGGTG CTGATCGAAC GCCAGGCCGA GCCGCACGAC
GTGGTGTGCG GCGGCTTCCT CGCCGCCGAC GCGATCGCCA TGCTGGCGCG GATCGGCATC
GACGTCTTCG CGCTGGGCGC GCATCCGATC GGGCGCACCC GCATCGTCGC CGGCCGCCGC
CGCGCCGAGG CCGCGCTGCC CTTCGCCGCC GCCGGCCTGT CGCGCAACCG GCTCGACGCC
GCCCTGCTCC AGGCGGCGAC CGACCAGGGG GCGGCGATCG AGCGCGGCGT CGCGATCCGG
CGGGTCGATC CGGCGACGCG CTGCCTCGAT CTCGCCGACG GCGCGCGGAT CGGCGGCGAG
GCGCTGTTCC TCGCCACCGG CAAGCACGAC CTGCGCGGCC ATCCCCGCGC CGCACCGCTC
GACGCCGACC CGGCGCTGGG GCTGCGCGTG CGGCTGCGCC CTTCGCCGGC GCTCGCCGCC
GCGCTGGCCG ATACGATCGA GCTCCACCTG TTCCGGGGTG GCTATGCGGG CCTGCTGGTG
CAGGAGGACG GCGGCGCGAA CCTCTGCCTG TCGGTCGCGC AGTCGCGGCT CAAGGCGGCG
GGCGGGCAGC CCGACCGGCT GATCGCGCTG CTGGAACGCG AAGCGCCGCT GCTCGCCGAG
CGGTTCGGCG CGGCGGTGGA GACGGGGCCC TGGAGCAGCA TCGCGCGGGT ACCCTATGGC
TGGCGCGCGA CGCAGGCGGC ACCCGGCCTG TTCCGGCTCG GCGACCAGGC GGCGGTGATC
GCCAGCCTGG CCGGCGACGG CATCGCCATC GCGCTGGCGA GCGCGGTCCG CGCCACCCAC
GCCTTCCTTC ACGACGGCCC GGACGCCGCC GCCGCCTTCC AGGCCGACAT CGCGCGCCGC
ACCCGCCGCC CGATCGCGCT CGCCAACCTG CTGCGCCATT GGGGCGAGAC GCCATGGATC
GCCGGGCCCC TCGCCGGCCT GCTCGGCCAT GTGCCGGGCC TGCTGCGGCA GGCGGCGGCG
ATGACGCGGG TGGGGGCAGG TCAGTCCTGC GCCAGCAACC GGTCGAGCGC CTCGTAG
 
Protein sequence
MRRTAALIAG GGPAGAAAAI LLAHGGAMPV LIERQAEPHD VVCGGFLAAD AIAMLARIGI 
DVFALGAHPI GRTRIVAGRR RAEAALPFAA AGLSRNRLDA ALLQAATDQG AAIERGVAIR
RVDPATRCLD LADGARIGGE ALFLATGKHD LRGHPRAAPL DADPALGLRV RLRPSPALAA
ALADTIELHL FRGGYAGLLV QEDGGANLCL SVAQSRLKAA GGQPDRLIAL LEREAPLLAE
RFGAAVETGP WSSIARVPYG WRATQAAPGL FRLGDQAAVI ASLAGDGIAI ALASAVRATH
AFLHDGPDAA AAFQADIARR TRRPIALANL LRHWGETPWI AGPLAGLLGH VPGLLRQAAA
MTRVGAGQSC ASNRSSAS