| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1179 |
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| Symbol | |
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| ID | 5198029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1341548 |
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| End bp | 1342660 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580726 |
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| Product | S-(hydroxymethyl)glutathione dehydrogenase |
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| Protein accession | YP_001261683 |
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| Protein GI | 148554101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.457911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTC GCGCCGCCGT TGCGTTCGAA GCCAAGAAGC CGCTGGAGAT CGTCGAGGTC
GACCTGGAAG GGCCGAAGGC GGGCGAAGTG CTGGTCGAGA TCATGGCGAC CGGCATCTGC
CACACCGACG CCTATACGCT CGACGGCTTC GACAGCGAGG GCATCTTCCC GTCGATCCTG
GGCCATGAGG GCGCGGGCAT CGTCCGCGAG GTCGGCGCCG GCGTCACCAG CGTCGTCCCC
GGCGATCACG TCATCCCGCT CTACACGCCC GAATGCCGCC AGTGCAAAAG CTGCCTCAGC
GGCAAGACCA ACCTGTGCAC CGCGATCCGC GCGACCCAGG GCAAGGGCCT GATGCCCGAC
GGCACCAGCC GCTTCAGCTA CAAGGGCCAG CCGATCTTCC ACTATATGGG CTGCTCGACC
TTCTCGAACT TCACCGTCCT GCCCGAGATC GCGGTCGCCA AGATCCGCGA GGACGCGCCG
TTCCAGACGA GCTGCTACAT CGGCTGCGGC GTCACCACCG GTGTCGGCGC GGTGGTCAAC
ACCGCCAAGG TGCAGGTCGG CGACAATGTC GTCGTGTTCG GCCTGGGCGG CATCGGCCTC
AACGTCATCC AGGGCGCGCG GCTGGCCGGC GCGAACAAGA TCATCGGCGT CGACATCAAC
CCCGACCGCG AGGAATGGGG CCGCAGGTTC GGCATGACCG ACTTCCTCAA CAGCAAGGGG
ATGAGCCGCG AGGACGTCGT CGCGAAGATC GTGCTGATGA CCGACGGCGG CGCCGACTAC
ACCTTCGACG CGACCGGCAA CACCGAGGTG ATGCGCACCG CGCTGGAGGC CTGCCACCGC
GGCTGGGGCA CCAGCATCAT CATCGGCGTG GCCGAGGCGG GCAAGGAGAT ATCCACCCGC
CCGTTCCAGC TCGTCACCGG CCGCAACTGG CGCGGCACCG CGTTCGGCGG CGCCAAAGGC
CGCACCGACG TTCCCAAGAT CGTCGACATG TACATGACCG GCAAGATCGA GATCGACCCG
ATGATCACCC ATGTCATGGG GCTGGAGGAG ATCAACACGG CGTTCGACCT GATGCACCAG
GGCAAGTCGA TCCGCTCGGT CGTGGTGTTC TGA
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| Protein sequence | MKTRAAVAFE AKKPLEIVEV DLEGPKAGEV LVEIMATGIC HTDAYTLDGF DSEGIFPSIL
GHEGAGIVRE VGAGVTSVVP GDHVIPLYTP ECRQCKSCLS GKTNLCTAIR ATQGKGLMPD
GTSRFSYKGQ PIFHYMGCST FSNFTVLPEI AVAKIREDAP FQTSCYIGCG VTTGVGAVVN
TAKVQVGDNV VVFGLGGIGL NVIQGARLAG ANKIIGVDIN PDREEWGRRF GMTDFLNSKG
MSREDVVAKI VLMTDGGADY TFDATGNTEV MRTALEACHR GWGTSIIIGV AEAGKEISTR
PFQLVTGRNW RGTAFGGAKG RTDVPKIVDM YMTGKIEIDP MITHVMGLEE INTAFDLMHQ
GKSIRSVVVF
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