| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1169 |
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| Symbol | |
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| ID | 5200032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1329254 |
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| End bp | 1331683 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640580716 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261673 |
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| Protein GI | 148554091 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.149635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACATC GACTCCGTTC GAAAAAGGCC ACGTCGAAGT TGCTTGTCTT GTTGGGAGCA
TCTTACGCGT CATTGGCCCA TGGACAGACG ACCGCCACGC CCGCCGACGT GCCGACGGCC
GAGGTCGAGG GCACGGAGAT CGTCGTCACC GCCAACAAGC GCGAGCAGCG GATCACCGAC
GTCGGCCTGA CGATCACCGC CTATTCCGGA AACACGCTGA AGACGCAGCA GATCGACTCT
CTGGCGGAGA TCGCGCAGAT CGTACCCGGC CTGTCCTACA CGCCGTCGCA GACCGCGACC
CCCGTCTACA CGCTGCGCGG GGTCGGCTTC TACGAGTCTT CCCTGGCGAA TTATCCGACC
ACCAGCGTCT ACGTCGATCA GGTTCCCCTG CCATTTCCGG TCCTGACCAC CCACGCCGCC
TATGATCTGG AGCGCGTCGA GGTGCTGAAG GGGCCTCAGG GAACGCTGTT CGGCCAGAAT
TCGACCGGGG GCGCCATCAA TTTCATCCCG GCGAAACCCA CCGCGACGTT CGCCACGGGC
GGAGACATCA GCTACAGCCG CTTCAATCGC ATCGATGCGA ACGGCTATGT CAGCGGGCCG
ATCGCCGAGG GACTGAAAGG CCGCCTATCC TTCAACGCCG CGCATGCCGA CGACTGGCAG
AAAAGCTATC TTCGCAACGA CGAGCTCGGC GAGGTCGAAT ATTATGCCGG GCGACTGTTG
CTCGACTGGA CGCCGTCCGA CCGGCTCACG CTCAATCTCA ACGTCAATGC CTGGCAGGAC
AAGAGCGATC CCCAGGCACC CCAATTCTTC GGCCTTCAGA GCCAGGCGCC GGCCACCTTG
CCGCCGCTGA TCGCCGCGCA GCCCTTCACG CCGCACGATG CCCGCCTGGC CGAATGGACG
CCGGGCGCCA ATCGCCCGCG CGCCAATAAC CGGTTCGCGC AGGCCGCGCT GCGCTTCGAT
TGGGAATTTG CCGACGACAT CATCTTCACC GGCATATCCA GCTATATCCA CTACAAGCAT
TTTCAGGTCG TCGACCAGGA CGGCACGGAA TTGCGCGATT CCGACGTGGC CGAAGACAGC
GGAACGATAA AATCCTTCAG CCAGGAGCTT CGCATCGCCA ATGCGGAATC CAGTTCGCTT
CGCTGGGTGC TGGGCGCCAA TTACGAGCGC AGCACGGTCA ACGAATATGC GCGCTACGAC
TTCCCCGATG AAAGCACCTC CGCGCTGTTC GGCTTCACCG GCGATCAGAA TACGTCCGAC
CAGAAGCTGC GCAACTACGC CCTGTTCGGG AATGCCGAAT ATGACATCTC GCCCGGGCTG
ACGATCAAGG CCGGCGCCCG TTATACCAAG GCGAAGCGCA GGGCCGTTCA GTGCACCTTC
GACAATGGCG ACGGCACATT TGCGCGGGCG ATCGACACCG TCGTGCAGCT CATCCATCTC
GGCATCATTC CGGTGCCGGG CTTCACGCCC TCGGGCGTCG TTCCGCCCTC GGTGGGATCG
GGCTGCACGG CGCTCGACAA TCTCACGAAT GACGGCACGC CCGCCACCTA CCTGCCCGGC
GCCTACAAGC GCTCCCTGAA CGAGGACAAT CTCTCCTGGC GGGTGGGGCT GGATTACAAG
GTCACGCCCG ACCTCCTGCT CTACGCGAAC ATATCGAGAG GCTATAAGGC GGGAAGCATG
CCGATATCGT CGGCGGCGAC GTTCGAGAAC TATATCGAAG TCAAACAGGA ATCGCTGCTC
GCCTATGAGG CCGGCTATAA ATTCACCAGC GATGGCGGAC GTTTCCGGTT GAACGGCGCG
GCCTTCTATT ACGACTACAA GGACAAGCAG ATCCGCGGGG CGATCATCGA TCCGGTCTTC
GGGAATCTCC AGGCGCTGGA CAATATCCCC AAGTCGCGGA TCTACGGCGC CGAAGCGGAG
GTCAGCTTCA TACCGCTCGA CGGGCTCACG CTCGGTGGGT CCGCCACCTA TATAAACAGC
AAGATCACCG AATATGTGAA CTTCAGCGCA TCCAACCAGG TCACGGATTT TGCCGGGTCG
AGAATTCCGT TCACCCCCAA ATGGTCGGGT TCCTTCACGG CCGACTATCG CTGGCGCGTC
GGATCCATTT CACCGTTCAT CGGCGCGTCC CTTTCGGCGC GATCGGGCAC GATCGCCAAT
ATCGGCGGCG ACCGGGGCTA CGTCCCGCCG CCCGGCGCCG TCCGGCAGGA GGTGCCGCTC
GGACGGACCT TCGACATCGA CGGCTATCTG CTGGTCGACC TGCGCGCCGG CATCGCGGGC
GAGAACGATC AATGGCGGGT CACGGTGTTC GGCAAGAACG TGTTCGACAA ATATTATATC
CTGAACACCT ACAAGGACTT CGACACGGTC AACCGCCTGA CGGGAATGCC GGCCACCTAC
GGCGTCACCG TGTCGTTCAA CTTTCGCTAG
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| Protein sequence | MTHRLRSKKA TSKLLVLLGA SYASLAHGQT TATPADVPTA EVEGTEIVVT ANKREQRITD
VGLTITAYSG NTLKTQQIDS LAEIAQIVPG LSYTPSQTAT PVYTLRGVGF YESSLANYPT
TSVYVDQVPL PFPVLTTHAA YDLERVEVLK GPQGTLFGQN STGGAINFIP AKPTATFATG
GDISYSRFNR IDANGYVSGP IAEGLKGRLS FNAAHADDWQ KSYLRNDELG EVEYYAGRLL
LDWTPSDRLT LNLNVNAWQD KSDPQAPQFF GLQSQAPATL PPLIAAQPFT PHDARLAEWT
PGANRPRANN RFAQAALRFD WEFADDIIFT GISSYIHYKH FQVVDQDGTE LRDSDVAEDS
GTIKSFSQEL RIANAESSSL RWVLGANYER STVNEYARYD FPDESTSALF GFTGDQNTSD
QKLRNYALFG NAEYDISPGL TIKAGARYTK AKRRAVQCTF DNGDGTFARA IDTVVQLIHL
GIIPVPGFTP SGVVPPSVGS GCTALDNLTN DGTPATYLPG AYKRSLNEDN LSWRVGLDYK
VTPDLLLYAN ISRGYKAGSM PISSAATFEN YIEVKQESLL AYEAGYKFTS DGGRFRLNGA
AFYYDYKDKQ IRGAIIDPVF GNLQALDNIP KSRIYGAEAE VSFIPLDGLT LGGSATYINS
KITEYVNFSA SNQVTDFAGS RIPFTPKWSG SFTADYRWRV GSISPFIGAS LSARSGTIAN
IGGDRGYVPP PGAVRQEVPL GRTFDIDGYL LVDLRAGIAG ENDQWRVTVF GKNVFDKYYI
LNTYKDFDTV NRLTGMPATY GVTVSFNFR
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