Gene Swit_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1165 
Symbol 
ID5198668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1323460 
End bp1323903 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID640580712 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261669 
Protein GI148554087 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.403646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGAGC TCCAGTCGGA CGGACGGATC ACCAATCACG ATCTCGCGGC GCGGGTCGGG 
CTGTCGCCCA GTCCCTGCCT GCGGCGGGTC CGCCAGCTCG AGGAGGCGGG GGTGATCAGC
AACTATGTCG GGCTGGTCGA TCCCGCCGCG CTCGGCCTGC CGGTGACGGC CTTCGTCCGC
GTCCGGCTCG ACGGGCAGGA CGATCGCCAC CTCGCCGCCT TCGAGGAGGA GGTCGCCCGC
TTTCCCGAGG TGATGGAATG CTATCTGATG ACGGGGGAGA GCGACTATCA GCTCCGCGTG
CTGGTCGCCT CGCTTGCCGC GTTCGAGGAT TTCCTGCGGC AGAAGCTGAC GCGGATCGCC
GGCGTGTCGC AGGTGGTTTC GAGCTTCGCC CTGCGTCCCG TCGTCTATCG CACCGCGATT
CCGGTCGATA AGACGGACGC ATGA
 
Protein sequence
MAELQSDGRI TNHDLAARVG LSPSPCLRRV RQLEEAGVIS NYVGLVDPAA LGLPVTAFVR 
VRLDGQDDRH LAAFEEEVAR FPEVMECYLM TGESDYQLRV LVASLAAFED FLRQKLTRIA
GVSQVVSSFA LRPVVYRTAI PVDKTDA