| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1160 |
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| Symbol | |
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| ID | 5198160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1311698 |
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| End bp | 1314187 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580707 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001261664 |
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| Protein GI | 148554082 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.380489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA CCCAGTCGCG CCAGCACAGG ATCCGGCCGA GCTGGCTGCA GATCGGCCTG
ATCGCCGCGA TCGGGCCCCT CCTGCTCGCC GCCATGGCCG TTTGGTTCGG GGGCGAGAGC
CGCCGCAGCG AGGCCACGCG CCAAGCCCTG CAATCGAGCT TCGTCTACCA GCGCGAGGTC
GAGCGGCTGT TCTCGCTGAT CAAGGATGCG GAAACCGGGC AGCGGGGCTA TCTGATCAGC
GGGTCGCCCG CCTTCCTCGG CCCCTATGAC GACGCCAGCG CGAAGATCGA CGCTCAGGTC
CGACAGGTCG AGCGGCTGCG CCCGGACTAT GCCGACGACA TGCAGTTCGC GCGGCTGAAA
CAGCTCATCG CCGCCAAGTT CGCCGAGATG CGCCAGGTCA TCGACATGCG CGACCGGACC
GGACCGGAAG CCGCCGCCGT CCGGTTGCGG CAGGGGCTGG GCAAGCGCCA GATGGACAGC
ATCCGCTCGA TCATCGGGGA GATGGAGGCG CAGGCCGACC GCGAAGTGGC GGAGCTGCAG
CGCCACCAGG CGGAACGGCT CGCGCGCAAC CGGACGATCA TCTGGAGCGC GATCGGCTTC
ATCGCGGTGA TCGCCGGCCT GCTCGGCTTC CTGCTCGGCC GCGGCCGGCG GACCAACAAC
CGCCTGGCCT TCGAGCATCA CGAGGCCGCC GCGCGCCAGC GCGCGATCTT CGACAGCGCC
ACCGACGGCA TCATCCTGAT CAACCCGAGC GGCAGCATCG AGACGATCAA CCACGCCGCC
GAGCGCATGT TCGGCTATAG CGCGGAGCAG CTGCTGCGGC GCGACATCTC GACCCTGGTC
GACATCGCGC CGGGCAACGG CGCCTTCCTC GAACGGCTCG GCATCCGCGA CGGACAATTG
CAAAAGACCG AGCTGATCGA CCTGACCGGC CGCGACCGGC AGGGCGAGCC GGTTCCGGTC
GACGTCGTGC TCGGCACCAT GCCGCTGCCC GACGGCATCC ACATCGTCGC TGCGCTGCGC
GACGCCGCCG GCCGCAAGGA GATCGACCGG CTCAAGGATG ATTTCATCTC GACCGTCAGC
CACGAGCTGC GCACCCCGCT GACCTCGGTC GTCGGCTCGC TGACCCTGCT GCGCAGCGGC
GCCGCCGGGC AATTGCCGGC CGAGGCGCAA CGACTCGCCG AGATCGCCGA GACCAACAGC
CAGCGGCTGA TCCGCCTGAT CAACGACATC CTCGACATCG ACCAGATCCG CAAGGGCCGG
ATGGCGTTCG AATATGCCGT GATCGACCTG CGCGACGTGA TGACCAAGGC GGCGCATGCG
ATGCAGGGCC TGGCCGACCG CCGCTCGATC CGGATCGAGA CGCTGATGCC GTCGACCCCG
GTGATGGCCT GCGCCGATGC CGACCGGCTG GTCCAGGTGG CGGGCAACCT GCTGTCCAAC
GCGGTCAAAT TCTCGCCCGA GGAAGCGACC GTCAGGTTCG AGTTGATCGA GGGGCGCGAC
GATCACGTCA TCCAGATCAC CGACAGCGGG CCGGGGATTC CGGCGGAGTT CGCCAACAAC
ATCTTCCATC GCTTCGCGCG CGGCAGCCAG CCGTCGCGGC AGATCATCGC GGGCACCGGC
CTCGGCCTCG CCATCTCGCG GGAGATCGTC CGCAGCCATG GCGGCGAGAT ATCGTTCGAG
AACCGCGCCG AGGGCGGCGC GCGCTTCGCG TTCAGCATCC CGCGCGACAC CACCCAGGCG
TCCGAAGCGA TCGAGATCGG CTCGGCGCGG CTGCTGATCT GCGAGGACGA CGCCGATGCC
GGGCGGACCG TCCAGTCGAT CCTGACCGCG CACGGCTATG CCAGCGACCA TGTGACGACG
ATGCGCGAGG CGATCGCCCA TGCCCGGTCG CAGCCCTATG CCGCGATCCT GCTCGACATG
ACCCTGGCCG ACGCCGACGG CTCCGACGTG ATCCGGGCGA TCACCAACGA CCCCGGCACC
GGCAAGCCGC CGATCATCGT CATCTCCGGC ATCGCCCCGC CCGCCGACAT CGATCACCAG
CCCTATGCCG GCTGGTTGCA GAAGCCGTTC GATCCGCGCC GGCTGATCCA GCTCATCCAG
CGCGCGATCC GCCGCCAGGG GCAAAGCAAG GCGGTGATCC TCCACATCGA CGACGACGGC
GACACGCGCG AGCTGTTCGC GGCGGCGCTG GCAGGGCGCG GGCTGCTGCT CAACGCGACC
AGCCTGTCGT CGGCCCGCGC GATCCTCGAC GAGCGCCGCC CCGACGCGAT CGTGCTCGAC
CTCGGCCTGC CCGACGGATC GGGGCTGGCG CTGCTGTCCG AGATCAAGTC CTGGGACAAG
CCCTTGCCCG TCATCGTCTA TTCGGCCCAG GAGATGGACG AGGAAACCCG GCGGCTCGCC
GATGCGGTGC TGGTCAAGTC GCGTCGCGCG CTGCCGAAGC TGACCTCGAC GGTGCTCGAC
ATCGTCGACC GTCACGGTGG ACCGCAATGA
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| Protein sequence | MTLTQSRQHR IRPSWLQIGL IAAIGPLLLA AMAVWFGGES RRSEATRQAL QSSFVYQREV
ERLFSLIKDA ETGQRGYLIS GSPAFLGPYD DASAKIDAQV RQVERLRPDY ADDMQFARLK
QLIAAKFAEM RQVIDMRDRT GPEAAAVRLR QGLGKRQMDS IRSIIGEMEA QADREVAELQ
RHQAERLARN RTIIWSAIGF IAVIAGLLGF LLGRGRRTNN RLAFEHHEAA ARQRAIFDSA
TDGIILINPS GSIETINHAA ERMFGYSAEQ LLRRDISTLV DIAPGNGAFL ERLGIRDGQL
QKTELIDLTG RDRQGEPVPV DVVLGTMPLP DGIHIVAALR DAAGRKEIDR LKDDFISTVS
HELRTPLTSV VGSLTLLRSG AAGQLPAEAQ RLAEIAETNS QRLIRLINDI LDIDQIRKGR
MAFEYAVIDL RDVMTKAAHA MQGLADRRSI RIETLMPSTP VMACADADRL VQVAGNLLSN
AVKFSPEEAT VRFELIEGRD DHVIQITDSG PGIPAEFANN IFHRFARGSQ PSRQIIAGTG
LGLAISREIV RSHGGEISFE NRAEGGARFA FSIPRDTTQA SEAIEIGSAR LLICEDDADA
GRTVQSILTA HGYASDHVTT MREAIAHARS QPYAAILLDM TLADADGSDV IRAITNDPGT
GKPPIIVISG IAPPADIDHQ PYAGWLQKPF DPRRLIQLIQ RAIRRQGQSK AVILHIDDDG
DTRELFAAAL AGRGLLLNAT SLSSARAILD ERRPDAIVLD LGLPDGSGLA LLSEIKSWDK
PLPVIVYSAQ EMDEETRRLA DAVLVKSRRA LPKLTSTVLD IVDRHGGPQ
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