| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1152 |
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| Symbol | |
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| ID | 5198347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1298624 |
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| End bp | 1299904 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580699 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001261656 |
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| Protein GI | 148554074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.657671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTCT CCGAACTCAA GGGGGATCCG GCCCACCTGC CCGAGCCCGA GCAGCAGCAG
CCGGCGCGGG CCCCTCGCTT CACCCGCAAG CGCGCCGCCT ATGCCGCGCT GCCCGTCGCC
GGGCTGATCC TGTTCGGCGC CTACGGCCTG GTCGGGCACG ACAAGGCCCA GGCCGATACC
CAGCCGCTGC CGACCGTGAC GGTCAGCCAG CCGATCGAGC GATCGATCGT CGAATGGGAC
GATTATGTCG GCCGGTTCGA AGCGAGCCAG GCGGTCGAGA TCCGGCCGCG CGTCTCGGGC
GCGCTGACCG GCATCCATTT CAAGGACGGC CAGATCGTCC GCAAGGGCCA GCTCCTCTTC
ACCATCGATC CGCGCCCCTT CGCGGCGGCG CTGGCCGAGG CGCGCGCCCG CGCGGCGAGC
GCCGCGACGG CGCTGTCGCT GGCGCATGCC GATCTCGCCC GCGCCAACCG GCTGATCGCC
GACCAGGCGG TGAGCGCGGA GGAGGTCGAC TCGCTGCGCG CCCGCGTCCA GTCGGCCGAG
GCCGCGCTGG CGGCAGCCCG CGCGCAGGTC CAGGCCCGCC GCCTCGACGT CGAGTTCACC
CAGGTCCGCG CGCCGATCTC CGGCCGCGTC TCCGACCGGC GGGTCGACAT CGGCAACCTC
GTCTCGGGCG ACGCGGCGGC AAGCGCCACC GTGCTGACCA CGGTCAACGC GCTCGACCCG
ATCTATTTCA GCTTCGACGG ATCGGAATCG CTCTACCTCA AGCAGCGGCG CCAGAAGGAT
GCCAGCGACC GGGCCGAGAT CCGGTTGCAG GACGAGCCCG ACTATCGCTG GAAGGGCAAG
GTCGACTTCA CCGACAATGC GCTCGACGAC GGATCGGGGA CAATCCGGGG CCGCGCGGTG
ATCGACAATC CCGGCTATTT CCTGACACCG GGCATGTTCG GCAACATGCG GCTGGCGGCC
GGCGGCGCGC GCAAGGCGCT GCTCGTCCCC GACGCCGCGG TGGTCAGCGA CCAGGCCCGC
AAGGTCGTCT ATGTCGTCAC CGGCAAGGAC GGCAGCGTCG AGGCCCGTCC GGTCGACGCC
GGCCCGCTGA TCAACGGCCT GCGGGTGATC CGCTCGGGAC TGAAGCCGAA GGACCGGGTC
GTGATCTCCG GCGTGCAGTT CGCCGCGAGC GCGCCCAAGG TCCAGACCAT CGCCGGCCGG
ATCGAGGCCA CCGCCGTCGC GGCGGCCCCG GCCGTCCCGG CGCCGATATC GTCACAGGCG
ACGCTGGCGG CAGCGCGCTG A
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| Protein sequence | MYLSELKGDP AHLPEPEQQQ PARAPRFTRK RAAYAALPVA GLILFGAYGL VGHDKAQADT
QPLPTVTVSQ PIERSIVEWD DYVGRFEASQ AVEIRPRVSG ALTGIHFKDG QIVRKGQLLF
TIDPRPFAAA LAEARARAAS AATALSLAHA DLARANRLIA DQAVSAEEVD SLRARVQSAE
AALAAARAQV QARRLDVEFT QVRAPISGRV SDRRVDIGNL VSGDAAASAT VLTTVNALDP
IYFSFDGSES LYLKQRRQKD ASDRAEIRLQ DEPDYRWKGK VDFTDNALDD GSGTIRGRAV
IDNPGYFLTP GMFGNMRLAA GGARKALLVP DAAVVSDQAR KVVYVVTGKD GSVEARPVDA
GPLINGLRVI RSGLKPKDRV VISGVQFAAS APKVQTIAGR IEATAVAAAP AVPAPISSQA
TLAAAR
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