| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1149 |
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| Symbol | |
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| ID | 5198304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1295316 |
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| End bp | 1296719 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580696 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001261653 |
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| Protein GI | 148554071 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.930112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC CATTCACCGC CCACGACCGC AAGCCGTTGC CGCCGGGCTT CCTCGACGAT
GTCCGCGCGG TGATCGGCGA TCGGCTCGGC ACCGGCGAGG CGATCCGCCT GCAACACGGA
TCGAGCGAGA CCCATTTCGA TCCGGTGCTG CCCGACGCGG TGGCGTTCGT CCGGTCGACC
GAGGAGGTGG CGGCGCTCGT CAAGCTCTGC GTCGCCGCCG AGGTGCCGGT CGTCGCCTTC
GGCGCGGGCA CCTCGCTCGA GGGCAACGTC ACCCCCGTCC GGGGCGGCCT GACCATCGAC
CTGTCGGAGA TGGACGCGAT CCTCGCGGTC AACCCGGAGG ACCTCGACTG CACCGTCCAG
GCCGGGGTGC GGCGCGAGCA GCTCAACGAA TATCTGCGCG ACCAGGGCCT GTTCTTCCCG
ATCGATCCCG GCGCCAACGC CACGATCGGC GGCATGGCCT CGACCCGCGC CTCGGGCACC
AACGCCGTCC GCTACGGCAC GATGCGCGAG GCGGTGCTGT CGCTGCGGGT GGTGACGCCC
GACGGCCGGA TCGTCCGCAC CGCCCGGCGC GCGCGCAAGT CGGCGGCTGG CTACGACCTC
ACCCGGCTGA TGATCGGCGC GGAAGGGACG CTCGGCATCA TCACCGAGAT CACCCTGCGC
CTGCACGGCA TCCCAGAGGC GATCTCCGCG GCGGTCTGCG GGTTCGATAC GTTGCAGGGC
GCGGTCGACA CCGTCGTCCA GTCGATCCAG ATCGGCGTGC CCGTCGCCCG GATCGAGATC
CTGGACGCGG CGCAGATGAA GGCGTGCAAC GCCTATTCGA AGCTCGACTA TGCCGAGCAG
CCGACGCTGC TGTTCGAGTT CCACGGATCG GAGCGCCATG TGCAGGAACA GGTCGAGACG
GTGCGCGAGA TCGCCGGCCA CAATGGCGGC GGCGAGTTCC TCTGGTCGCA TCGGCCCGAA
GAGCGCAGCC GGCTGTGGAA GGCACGGCAC GAGGCCTATT ACGCCGCGAT GAGCCAGCGC
CCCGGCGCGG TCGGCTGGAC CACCGACGTC TGCGTGCCGA TCAGCCGCCT CGCCGAATGC
ATCGTCGAGA CCCAGGCCGA CCTGGCGCGC TCCGCCATCC CGGCGACGAT CGTCGGCCAT
GTCGGCGACG GCAATTTCCA CGTCGTCTTC GCGGTCGACC CGGCCGCCCC GCACGAGATG
GCGGAGGTCG AGGCGCTCAA CGAACGGATC GTCGCCCGCG CGCTGGCGAT GGACGGCACC
TGCACCGGCG AGCATGGCAT CGGCCTGGGC AAGCAGCGCT TCCTGCTCGA CGAGCTGGGC
GACGCGGTCG ACCTCATGCG GCTGATCAAG CGGGCGATCG ACCCGAAGGG CCTGTTCAAT
CCTGGCAAGA TATTCCAGCT ATGA
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| Protein sequence | MTAPFTAHDR KPLPPGFLDD VRAVIGDRLG TGEAIRLQHG SSETHFDPVL PDAVAFVRST
EEVAALVKLC VAAEVPVVAF GAGTSLEGNV TPVRGGLTID LSEMDAILAV NPEDLDCTVQ
AGVRREQLNE YLRDQGLFFP IDPGANATIG GMASTRASGT NAVRYGTMRE AVLSLRVVTP
DGRIVRTARR ARKSAAGYDL TRLMIGAEGT LGIITEITLR LHGIPEAISA AVCGFDTLQG
AVDTVVQSIQ IGVPVARIEI LDAAQMKACN AYSKLDYAEQ PTLLFEFHGS ERHVQEQVET
VREIAGHNGG GEFLWSHRPE ERSRLWKARH EAYYAAMSQR PGAVGWTTDV CVPISRLAEC
IVETQADLAR SAIPATIVGH VGDGNFHVVF AVDPAAPHEM AEVEALNERI VARALAMDGT
CTGEHGIGLG KQRFLLDELG DAVDLMRLIK RAIDPKGLFN PGKIFQL
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