| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1138 |
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| Symbol | |
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| ID | 5198840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1282456 |
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| End bp | 1283370 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580685 |
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| Product | sterol desaturase-like protein |
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| Protein accession | YP_001261642 |
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| Protein GI | 148554060 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.713792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACAT TGTTCGAGAG CCTTCCCCTG CTCGGCAGGG TGGTGGTCAG CCAGATCATC
TGGCTCTTCC TGTTCACCGC CCTGTTCGTT CCGCTCGAAC GGCTGGCCGG CGTCCATCGC
CAGCCGACCC GGCGGCCGCA GATGCTCGTC GATATCGGCT ACTTCTTCCT GTCGGGCCTG
ATCCCCGTCT TCATTCTGTC GATGCCGCTG GGGGCGATCA CCGCGCTGTC CCGTCAGGCG
CTGCCGGAAA GCTACCACCT CTGGATCACG GGCCTGCCGG TCGCGGTCCA GGTCGGGCTC
GCGATCCTGA TCGGCGAGTT CGGCTTCTAC TGGGGCCACC GGATCATGCA CCAGGTGCCC
TGGCTGTGGC GCTTCCACGC CATCCACCAC GAGCCGGTGC GGATGGACTG GCTGGTCAAC
ACCCGCGCCC ATCCGGTCGA CCTCGTCTTC ACCCGCATGT TCGGCCTCAG CCTGGTCTAC
ATCGCCGGGC TCGGCACGCC CGGATCGGGA TCGGGCAGCA TCATCCCCCT CGTCGTCCTG
TTCGTCGGGA CCTTCTGGGG ATTCTTCATC CATTCCAACC TGAACGTCCG GCTGGGCTTG
CTCGAGCATG TCCTGTCGTC GCCGCGCTTC CATCATTGGC ACCATTCGCG GGTCGACCAT
GTCAACCGGA ACTATGCGTC AACGCTGCCG ATCTACGACC GGCTGTTCGG CACCCATCAT
CTTCCCAGGC AATGGCCGCC GAGCTACGGC ATCGCGCCGG AAAACCGGCC GGATGTGCTG
ATCGCCGCGC AATATGGCGA GGCGGACGAA GCGCCGCCCG CTCCCGTCAG GGACGCGGCG
CCCGCTCAGG AAGGATCGCG GGCGTCGAAC ACGTCGAATT CGTGCGCGAT CGATCCCTCG
ACCAGCATGT CGTAG
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| Protein sequence | MLTLFESLPL LGRVVVSQII WLFLFTALFV PLERLAGVHR QPTRRPQMLV DIGYFFLSGL
IPVFILSMPL GAITALSRQA LPESYHLWIT GLPVAVQVGL AILIGEFGFY WGHRIMHQVP
WLWRFHAIHH EPVRMDWLVN TRAHPVDLVF TRMFGLSLVY IAGLGTPGSG SGSIIPLVVL
FVGTFWGFFI HSNLNVRLGL LEHVLSSPRF HHWHHSRVDH VNRNYASTLP IYDRLFGTHH
LPRQWPPSYG IAPENRPDVL IAAQYGEADE APPAPVRDAA PAQEGSRASN TSNSCAIDPS
TSMS
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