| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1132 |
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| Symbol | nrdR |
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| ID | 5200143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1275668 |
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| End bp | 1276132 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580679 |
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| Product | transcriptional regulator NrdR |
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| Protein accession | YP_001261636 |
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| Protein GI | 148554054 |
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| COG category | [K] Transcription |
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| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
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| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.26106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTGCC CCTTCTGCGC CCATGACGAC AGCCAGGTGA AGGACAGCCG CCCCACCGAC
GACGGGGCGG CGATCCGGCG GCGACGGCAA TGCGAAGGGT GCGGCGCGCG CTTCACCACC
TTCGAGCGGA TCCAGCTCCG CGAGATGACG GTGGTGAAGA GCGACGGCCG GCGCGAGGTG
TTCGACCGCT CGAAGCTCGA ACGGTCGATC AGCGTCGCCT GCCGCAAGCG GCCGGTCGAT
CCCGCGCGGA TCGAGCGGCT CGCGACCGCG ATCCAGCGCC AGATCGAGAC GAGCGGCGAC
AGCGAGATCC CCGCCGCCTC GGTCGGCGGC ATGGTGATGG ACGGGCTCAA GGCGCTCGAC
AGCGTCGCCT ATATCCGCTT CGCGAGCGTC TATAAGGATT TCCGCGAAGC CAAGGACTTC
GAGGATTTCG CCGGTGCCGT GAGCGAAGCC GGGCGGGACG GTTGA
|
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| Protein sequence | MRCPFCAHDD SQVKDSRPTD DGAAIRRRRQ CEGCGARFTT FERIQLREMT VVKSDGRREV
FDRSKLERSI SVACRKRPVD PARIERLATA IQRQIETSGD SEIPAASVGG MVMDGLKALD
SVAYIRFASV YKDFREAKDF EDFAGAVSEA GRDG
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