| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1126 |
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| Symbol | |
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| ID | 5199167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1270506 |
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| End bp | 1271753 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580673 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001261630 |
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| Protein GI | 148554048 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.926939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGGCT TCTTCGCCTT GCTCGTGCAC GGCCTCATCT ATTCCGTCGT CATGGGCGCC
GTTTTTCGGA CGAGGCACAG CACCGGGCTC GGCGTCTTCT TCTGCCTGCT CGGCACGATG
CACTTCCTCG AGACCTATCT GGCGGCGACC TTCTTCATCG AACTGCCCTT CGGCCTGATC
TCCCCCGGCT CGACCGTGAT GTTCACGGGC AAGCTCGCCT TCTTCCTGCT GCTCTACATC
AAGGAGGATG CCGAGGTGAT GCGGCAGCCG ATCTACGGCC TGCTCGCCGG CAACGTCCTG
ATGATCGCGC TGGGCCTGAT CCTGCGCCTC TACGGCCAGA CCGCGAACCT GCCGGGCTAT
AATCCCGATT TCAACTTCGT CGACCAGATG GGCCTGCTCA TGGTCGTCGG CTCGCTATTG
CTGTTCATCG ACCTGATCGC CCTCGTCATC ATCTATGAGC GGCTCGGCCG GTCGATCGCG
AGAACGGTTC CGATCCGGAT GTTCATCAGC CTGGCGCTGG TCCTGAGCTT CGACCAGTTC
TTCTTCTACC TCGGGCTCCA TTTCCTCGCG GGGGTGCCGC CCTCTGCCTT CTACGGGGGA
TGGATCGCCA AGACCGCCGC GGCCGCCTTC TTCAGCCTGG TGATGACCGT CTATCTGCGC
TTCTTCGAAC GGCAGCCGCT ACCCGCGCGG GCGCGCAGCG CGGTCGACGT GTTCGATCGG
CTGACCTACC GGCATCGCTA CGAAAGGCTG GTGGAGCGGG TCGGCCGGGA TGCGCTGACC
GGGCTTCTCG ATCGCGGGCA GCTCGATGCG AAGGGAACCG CGATGCTGCA GGCGGCCTCC
CGTTCGAACG CGTCGCTCAG CCTGATGATG ATCGACATCG ACCATTTCAA GTCGGTCAAC
GACAGCCACG GCCATGTCGT CGGCGACGGC GTGATCCGCA CGATCGCCGA GACGATCGCC
GCCGCGAAGG GCGAGGGCGC CGAGCTGTTC CGCTATGGCG GCGAGGAATT CGCCCTGCTG
TGTCCGCTGA CGCTCCCGGA CGCCGTGGCG TCGGCCGAGC GGATCCGGGT GGCGGTGGCC
GACAGCCGCC ATCCGGAACT GGAGCGGGCG ATGACGGTGA GCATCGGCAT CGCCGCCTTC
CCGGCACATG CCAGGAGCTT CTGGCAACTG ATCGAGAAGG CCGACGCCGC CCTCTATCAG
GCGAAGGCGG CCGGCCGGAA CAGGATCAGT CCCGCGCTTC CTTCCTGA
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| Protein sequence | MYGFFALLVH GLIYSVVMGA VFRTRHSTGL GVFFCLLGTM HFLETYLAAT FFIELPFGLI
SPGSTVMFTG KLAFFLLLYI KEDAEVMRQP IYGLLAGNVL MIALGLILRL YGQTANLPGY
NPDFNFVDQM GLLMVVGSLL LFIDLIALVI IYERLGRSIA RTVPIRMFIS LALVLSFDQF
FFYLGLHFLA GVPPSAFYGG WIAKTAAAAF FSLVMTVYLR FFERQPLPAR ARSAVDVFDR
LTYRHRYERL VERVGRDALT GLLDRGQLDA KGTAMLQAAS RSNASLSLMM IDIDHFKSVN
DSHGHVVGDG VIRTIAETIA AAKGEGAELF RYGGEEFALL CPLTLPDAVA SAERIRVAVA
DSRHPELERA MTVSIGIAAF PAHARSFWQL IEKADAALYQ AKAAGRNRIS PALPS
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