Gene Swit_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1125 
Symbol 
ID5199166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1269431 
End bp1270363 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID640580672 
Producthypothetical protein 
Protein accessionYP_001261629 
Protein GI148554047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.837099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG CCGGCCATCA TCGCGTCCCC TTGTCCCACC TGCTGCTGGC GCTGGGCGTC 
GTGCTCGTCT GGGGGACCAA TTTCACCGTC ATCCGGGTCG CGCTCGACGA ACTGCCGCCG
CTGCTGTTCG CCGCGCTGCG CTTCTTCTTC GCGCTGGTGC CGGCCGCCTT CTTCATCCGC
CGCCCGGCGG TGTCGTGGCG GTCGCTGGCC GCCTATGGCG TGCTGATCGG CGTCGGGCAG
TTCGGGCTGC TCTACATCGC GATGGACGGC TTCATCTCGC CGGGGCTGGC GTCGCTGGTG
GTGCAGAGCC ATGTCTTCTT CACCATCGTC CTGGCGATGC TGTTCTCGGG CGAGGCGTTG
CGGCCGTTCC AGATCGTGGC GCTGTCGCTG TCGGTGCTGG GGATCGTGCT CATCATCGAA
CATGGCGACG CCAGCGCGAC GCTGTTCGGC CTCGCCCTGA CGCTGGTCGC GGCCTTGTGC
TGGGGCATCG GCAACCATGT CGCCAAGGCG AGCGGGGCGA CCGACATGCT CGGCTTCGTC
GTCTGGGCCA GCCTGTTCGC GGTGCCGCCG CTGTTCCTCC TCGCGCTGCT GGCGGAGGGC
TGGCCGGCGA TCGCCGGCGC GATCACCCAT GCCGGGCCGA CCGCCTGGGC GGCGGTGCTG
TGGCAGTCGG TCGGCAACAC CATGTTCGGC TATGCCGCCT GGGGCTGGCT GCTCGCGCGC
CATCCGGCGG CGGCGATCAC GCCGACGGCG ATGCTGGTGC CGGTCGTCGG CATGGCGACC
TCCGCCCTCG TCCTCGGCGA GGCGCTGCCC GCCTGGAAGA TCGCCGCCGC CGCGCTGGTG
ATCGGCGGGC TCGCGCTCAA CATGCTGTGG CCGCGCGCTG CCCGCCTGAT CGTCACATCG
CGAGCATCCA CGCCGCCATC GCCACCATCA TGA
 
Protein sequence
MNDAGHHRVP LSHLLLALGV VLVWGTNFTV IRVALDELPP LLFAALRFFF ALVPAAFFIR 
RPAVSWRSLA AYGVLIGVGQ FGLLYIAMDG FISPGLASLV VQSHVFFTIV LAMLFSGEAL
RPFQIVALSL SVLGIVLIIE HGDASATLFG LALTLVAALC WGIGNHVAKA SGATDMLGFV
VWASLFAVPP LFLLALLAEG WPAIAGAITH AGPTAWAAVL WQSVGNTMFG YAAWGWLLAR
HPAAAITPTA MLVPVVGMAT SALVLGEALP AWKIAAAALV IGGLALNMLW PRAARLIVTS
RASTPPSPPS