Gene Swit_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1117 
Symbol 
ID5198729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1260571 
End bp1261512 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content70% 
IMG OID640580664 
Productdienelactone hydrolase-like protein 
Protein accessionYP_001261621 
Protein GI148554039 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.218404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.24228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGG TAAGGTCGTT CGCTGCATTC TGTCTGTCGC TGATCGGCGC CACCGCCGCC 
CATGCGGCAT CGCCGATCAC CCTGTGCGAG GGGGTGTGGC TCGACGCCAC GCGCGGCCGG
CCGGTGCCGG TGCGGATCCG CATGCCGGCC GGGCGGGAGA AGGTCGGCGT CATCCTGTTC
AGCCACGGCC TCGGCGGCTC GCTCGACGCG GGGACGATCT GGGCGCATGC CTGGGCGGAG
GGCGGCTTCG CGGTCGTCAA CATCCAGCAT GAGGGCAGCG ACAGCGCGAT CTTCGGCAAG
CCGGGCTTCA AGTCGGCGCT CAACGGCGAG CAGCTCGCCG CCCGCGCGCG CGATATCCAG
TTCGTGATCG GCGAGCTCGG CCGGCGCCTG CTCGAAGGGC CGTGCGACCT CCAGCGGATC
GACCTCAACC GGATCGGCGT CGCCGGCCAC AGCTTCGGCG CCCAGACCAT CCAGGCAATC
GCGGGGCAGA GCTTCCCGGT CAAGATCGAG CCGCCGCTGA GCGATCCCAG GGTGCGGGCG
GCGGTCGGCC TCAGCCCCTC GCCCCCGCTC ACCGGATCGC CCGAGAGCGC CTTCGCGACG
ATCCGCATCC CGTTCCTGTC GATCACCGGC ACCGCCGACG CGGTGCCCTT CGTCACGCCG
ATCACCGCGC TCCAGCGGCA GCAGCCCTTC CGGCTGATGC CGCCGGGCGA GAAATATCTG
CTGGTGCTGA AGGACGGCAC CCACGAGATG TTCGCGGGCC AGCTGTTCCG CACCACGCTG
AACGGCGAAC CGACCCCGCA CATCCGCAAC ACGGTGATCG CGACGACGCT GGCCTTCTGG
TACGCGACGC TCGGCCATGA CAAGCGGGCG CTGCAATGGC TGCAGAGCCC GACCGGCCTG
CGCGCCGGCC TGCCACCCGG CGACGTCTTC GAGAGCAAAT AG
 
Protein sequence
MGLVRSFAAF CLSLIGATAA HAASPITLCE GVWLDATRGR PVPVRIRMPA GREKVGVILF 
SHGLGGSLDA GTIWAHAWAE GGFAVVNIQH EGSDSAIFGK PGFKSALNGE QLAARARDIQ
FVIGELGRRL LEGPCDLQRI DLNRIGVAGH SFGAQTIQAI AGQSFPVKIE PPLSDPRVRA
AVGLSPSPPL TGSPESAFAT IRIPFLSITG TADAVPFVTP ITALQRQQPF RLMPPGEKYL
LVLKDGTHEM FAGQLFRTTL NGEPTPHIRN TVIATTLAFW YATLGHDKRA LQWLQSPTGL
RAGLPPGDVF ESK