Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1117 |
Symbol | |
ID | 5198729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1260571 |
End bp | 1261512 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580664 |
Product | dienelactone hydrolase-like protein |
Protein accession | YP_001261621 |
Protein GI | 148554039 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.218404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.24228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGG TAAGGTCGTT CGCTGCATTC TGTCTGTCGC TGATCGGCGC CACCGCCGCC CATGCGGCAT CGCCGATCAC CCTGTGCGAG GGGGTGTGGC TCGACGCCAC GCGCGGCCGG CCGGTGCCGG TGCGGATCCG CATGCCGGCC GGGCGGGAGA AGGTCGGCGT CATCCTGTTC AGCCACGGCC TCGGCGGCTC GCTCGACGCG GGGACGATCT GGGCGCATGC CTGGGCGGAG GGCGGCTTCG CGGTCGTCAA CATCCAGCAT GAGGGCAGCG ACAGCGCGAT CTTCGGCAAG CCGGGCTTCA AGTCGGCGCT CAACGGCGAG CAGCTCGCCG CCCGCGCGCG CGATATCCAG TTCGTGATCG GCGAGCTCGG CCGGCGCCTG CTCGAAGGGC CGTGCGACCT CCAGCGGATC GACCTCAACC GGATCGGCGT CGCCGGCCAC AGCTTCGGCG CCCAGACCAT CCAGGCAATC GCGGGGCAGA GCTTCCCGGT CAAGATCGAG CCGCCGCTGA GCGATCCCAG GGTGCGGGCG GCGGTCGGCC TCAGCCCCTC GCCCCCGCTC ACCGGATCGC CCGAGAGCGC CTTCGCGACG ATCCGCATCC CGTTCCTGTC GATCACCGGC ACCGCCGACG CGGTGCCCTT CGTCACGCCG ATCACCGCGC TCCAGCGGCA GCAGCCCTTC CGGCTGATGC CGCCGGGCGA GAAATATCTG CTGGTGCTGA AGGACGGCAC CCACGAGATG TTCGCGGGCC AGCTGTTCCG CACCACGCTG AACGGCGAAC CGACCCCGCA CATCCGCAAC ACGGTGATCG CGACGACGCT GGCCTTCTGG TACGCGACGC TCGGCCATGA CAAGCGGGCG CTGCAATGGC TGCAGAGCCC GACCGGCCTG CGCGCCGGCC TGCCACCCGG CGACGTCTTC GAGAGCAAAT AG
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Protein sequence | MGLVRSFAAF CLSLIGATAA HAASPITLCE GVWLDATRGR PVPVRIRMPA GREKVGVILF SHGLGGSLDA GTIWAHAWAE GGFAVVNIQH EGSDSAIFGK PGFKSALNGE QLAARARDIQ FVIGELGRRL LEGPCDLQRI DLNRIGVAGH SFGAQTIQAI AGQSFPVKIE PPLSDPRVRA AVGLSPSPPL TGSPESAFAT IRIPFLSITG TADAVPFVTP ITALQRQQPF RLMPPGEKYL LVLKDGTHEM FAGQLFRTTL NGEPTPHIRN TVIATTLAFW YATLGHDKRA LQWLQSPTGL RAGLPPGDVF ESK
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