| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1113 |
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| Symbol | |
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| ID | 5198710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1252181 |
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| End bp | 1252927 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640580660 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_001261617 |
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| Protein GI | 148554035 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.49625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG CGGCAGGCGC GCTGCTGGGG GTGATCTTCG GCAGCTTCAT CGCGACGATC
GTCGTCCGCT GGCCGCAGGG CCGGTCGGCG GCGCGCGGCC GTTCCGCCTG CGACGGGTGC
GGCGCGCCGC TCGGCCCGGC GCGGCTCGTG CCCGTCCTGA GCTATGCCGT GCAGCGCGGC
CGGGCGGCCT GTTGCGGCGG CCGGATCGAC CCCGTCCATC CGCTCGCCGA GCTGCTCGGC
GCGGCGATCG GCGCGATCGG CGTGGCGGCA GCCCCCGATC TCCAGCAGGC GATCGCCGGG
GCGTTGTTCG GCTGGCTGCT GCTCGCCCTG GCGCTGCTCG ACCTCCGCCA TTTCTGGCTG
CCCGACCGGC TGACGATGGT GCTGGCGCTG GCCGGGCTGG TCGTCGGACT GGCCGGACTG
CCGCCCGATC TTGCCGACCG GCTGATCGGC GGCGTGGCGG GTTTCCTGCT GCTGGAGGCG
GTGCGCCACG GCTATCGCCG GCTGCGCGGC CGCGACGGGA TGGGGGGCGG CGACCCCAAG
CTGTTCGGGG CGATCGGCCT GTGGCTCGGC TGGCGCATGT TGCCGATCGT CCTGCTCGGC
GCGGCGCTGG CGGGGTTGGC GGCGGCGCTG CTCCTGTCGC TGGCGGGCCG CCGCCTCGGC
GCGACCTCGC GGCTGCCCTT CGGCCCCTTC CTGGCGCTCG CCGCGTGGGG CGCCTGGGTG
GCCGCCGCGA TGGGGGCGAT CGGGTAA
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| Protein sequence | MLIAAGALLG VIFGSFIATI VVRWPQGRSA ARGRSACDGC GAPLGPARLV PVLSYAVQRG
RAACCGGRID PVHPLAELLG AAIGAIGVAA APDLQQAIAG ALFGWLLLAL ALLDLRHFWL
PDRLTMVLAL AGLVVGLAGL PPDLADRLIG GVAGFLLLEA VRHGYRRLRG RDGMGGGDPK
LFGAIGLWLG WRMLPIVLLG AALAGLAAAL LLSLAGRRLG ATSRLPFGPF LALAAWGAWV
AAAMGAIG
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