| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1112 |
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| Symbol | |
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| ID | 5198709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1250133 |
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| End bp | 1252103 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580659 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001261616 |
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| Protein GI | 148554034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.245577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.568355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCA GATGGATCGC GGCCGCGCTG GCGCTGGCCG CTACGGGCGC ATCGGCGCAG
ACCGATCTCG CGACTGCCTT CGGCGCGCGC GAGCAGATCG AGCAGATCAG CCTGTCGCCC
GACGGATCGC GGCTGGCCTA TGTCGTCCCG ACCGCAGGGC AGGGCTCGGC GCTGCTGACT
TTCGCGCCCG GGGTCGACAA GGAGCCCAAG GTCGCCTTCG CCATGAACGG CGAGCCCGAT
CGCCTGTCGG ACTGCAACTG GATCGCCAAC GACCGGCTGG TGTGCGGGAT ATGGGGCCTC
GCCCAGCCCG CCGAGTTGGC CAATGCGGGT ATCATCCCCT ATTCGCGGGT CGTCGCGATC
GACGCCAATG GCGGCAATCC GCGCATGCTC AGCGCGATGC ACAACAGCAA TTCGCGCGGC
TACAACCTGC GCGGCGGCGA GGTGATCGAC TGGCTGCCGG AGGAGGACGG CAACGTCCTG
ATGACCCGCA ACCAGCTTCC CGACTCCCGC CTGGGCACGC GCCTGGGCAA GAGCGAGGAA
GGCATGACGG TGGACAAGGT CGACACGCGC ACGCTCAGCT CGTCGCGCGT CGAAAGCGCC
CAGCAGGATG TCTCCACCTA TATCAGCGAC GGCCACGGCA CGCTGCGGAT CAAGGCGATC
CAGCAGAATG AGGGTGGCCG CGACAGCGGC GTGATCCGCT ATTATTACCG GCAGGCGGGC
AGCAAGAAAT GGGAGCCGCT GTCCGATTAC AACTATGTCA CCGAGGATGG GTTCGAGCCG
GACTCGGTCG ATTATGAGCG CAACGCCGTC TATGGCTTCC GCAAGAAGAA CGGCCTCAAG
GCCGTCTATC GCATCGCGCT CGACGGATCG CTCAAGGAGG AGCTGGTCTA TTCGCGGCTC
GATGTCGACG TCGATAAGCT GATCCATATC GGCCGGCGCA ACCGCGTGAT CGGCGCCAGC
TATGCCACCG ATATCCGCCA GGCGGTCTAT TTCGACGCCG ACCTCGCCAA GCTCAGGGAC
TCGCTGGCCA AGGCGCTGCC GGGGCAGCCG ATGGTCCGCA TCGTCGATTC GAGCATGGAC
GAGAAGAAGC TGCTGATCTG GGCGGGCAGC GACAAGGATC CGGGCGTCTA TTATATCCTC
GACCGGACGA CCAAGCAGAT GGCGACCTTC CAGCCGAACC GGCCGCAGCT CGAAGGCGTC
CAGCTCGCCG AGATGAAGCC GGTGTCCTAT CCGGCCGCCG ACGGCACCAT GATCCCCGGC
TATCTGACCT TGCCGGCCGG CAGCGCGGGC AAGAACCTCC CCGCGATCGT CATGCCGCAT
GGCGGCCCCG GCGCGCGCGA CACATGGGGT TTCGATTGGC TGGCGCAATA TTATGCGGCG
CGCGGCTTCG CCGTGCTGCA GCCCAATTTC CGCGGATCGA CCGGCTATGG CGATGACTGG
TATCTGCAGA ACGGCTTCAA GTCCTGGCCG ACGGCGGTCT CCGACATCGG CGACGGGGCG
CGCTGGATGA TCAAGCAGGG GATCGCCGAT CCCAGCAAGC TCGCGGCGGT CGGCTGGTCC
TATGGCGGCT ATGCGGCGCT CCAGTCGGCG GTGGTCGACC CCGCCTTGTT CAAGGCGATC
GTCGCGATCG CCCCGGTGAC CGACCTGCCG CTGCTCAAGG AGCAGTCGCG CTGGTGGAGC
GATTATCGCC TCGTCAGCGA CTTCATCGGA TCGGGACCGC AGGTGCTGCA GGGATCGCCC
GCGCGCAACG CGGCGCAGAT CAAGGCCCCG GTGATGCTGT TCCACGGCAC GATGGACCGC
AACGTCAATG TCGAGCAGAC GCGGGTGATG GACCGGGCGC TGGCCGCGGC CGGCGTCCCG
CACAAGACGG TGATCTTCGA GAACCGCGAC CACCAGATCG AGGACGGCGC GATGCGCGCA
CGGATGCTCC GCGACAGCGA TGCCTTCCTG CGCCAGTCGA TGGGGATGTG A
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| Protein sequence | MTVRWIAAAL ALAATGASAQ TDLATAFGAR EQIEQISLSP DGSRLAYVVP TAGQGSALLT
FAPGVDKEPK VAFAMNGEPD RLSDCNWIAN DRLVCGIWGL AQPAELANAG IIPYSRVVAI
DANGGNPRML SAMHNSNSRG YNLRGGEVID WLPEEDGNVL MTRNQLPDSR LGTRLGKSEE
GMTVDKVDTR TLSSSRVESA QQDVSTYISD GHGTLRIKAI QQNEGGRDSG VIRYYYRQAG
SKKWEPLSDY NYVTEDGFEP DSVDYERNAV YGFRKKNGLK AVYRIALDGS LKEELVYSRL
DVDVDKLIHI GRRNRVIGAS YATDIRQAVY FDADLAKLRD SLAKALPGQP MVRIVDSSMD
EKKLLIWAGS DKDPGVYYIL DRTTKQMATF QPNRPQLEGV QLAEMKPVSY PAADGTMIPG
YLTLPAGSAG KNLPAIVMPH GGPGARDTWG FDWLAQYYAA RGFAVLQPNF RGSTGYGDDW
YLQNGFKSWP TAVSDIGDGA RWMIKQGIAD PSKLAAVGWS YGGYAALQSA VVDPALFKAI
VAIAPVTDLP LLKEQSRWWS DYRLVSDFIG SGPQVLQGSP ARNAAQIKAP VMLFHGTMDR
NVNVEQTRVM DRALAAAGVP HKTVIFENRD HQIEDGAMRA RMLRDSDAFL RQSMGM
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