Gene Swit_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1108 
Symbol 
ID5199636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1246708 
End bp1247157 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID640580655 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001261612 
Protein GI148554030 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.946432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC TCACCCTGAC CCGCCTGATC GACGCGCCGC GCGACAAGCT GTTCCGCTGC 
TGGACCGATC CCGAGCTGAT CCCGCTGTGG TTCTGCCCGC CGCCCTGGGG CGTGTCGAAG
GCCGAGGTCG ATCTGCGGCC CGGCGGTTCG TGCCTGATCG TGATGCGCGG TCCCGAAGGG
CAGGAGATGC CCAATCCCGG CGTCTATCTG GAGGTCGTCC CGAACGAGAA GCTGGTCTTC
ACCGACGCCT TCACCAGCGC CTGGGAACCG TCGGAGAAGC CGTTCATGAC CGGCATCCTC
ACCTTCGCCG ACGAAGCCGG CAAGACCCGC TACACCGCGA CCGTCCGCCA CTGGACCGCC
GAGGACAAGG CCCAGCACGA GGCGATGGGA TTCCATGAGG GCTGGGGCAT CGCGACCGAC
CAGCTCGAGG CGCTGGCCAA GCGGATCTGA
 
Protein sequence
MHDLTLTRLI DAPRDKLFRC WTDPELIPLW FCPPPWGVSK AEVDLRPGGS CLIVMRGPEG 
QEMPNPGVYL EVVPNEKLVF TDAFTSAWEP SEKPFMTGIL TFADEAGKTR YTATVRHWTA
EDKAQHEAMG FHEGWGIATD QLEALAKRI