| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1092 |
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| Symbol | |
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| ID | 5198819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1224565 |
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| End bp | 1227255 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580638 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001261596 |
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| Protein GI | 148554014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.75364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG ACAAGACCTT CGACCCCGCC GCCATCGAGG CGCGCTGGTA TGCCCATTGG
GAAGACAACG GCCTGTTCCG CCCGGAACGT CCGGAGGCCG AGCCCTATAC CATCGTGATC
CCGCCGCCCA ACGTCACGGG CAGCCTGCAC ATCGGCCATG CGCTCGACGA CACGTTGCAG
GACGTGCTGA TCCGCCACGC CCGGCTGAAG GGCAAGGACG CGCTGTGGGT GGTCGGCACC
GACCATGCCG GCATCGCCAC CCAGATGGTG GTCGAGCGGC AGCTCGACGC CAAGGGGCAG
AAGCGCACCG ATTTCACGCG CGAGCAGTTC ATCGCCAAGG TGTGGGAGTG GAAGGAGGAG
AGCGGCGGCA CGATCACCCG CCAGCTCCGC CGGCTCGGCG CGTCGTGCGA CTGGGCGAAC
GAGCGCTTCA CCATGGACGA GGGCTTCTCG AAGGCGGTCC TCAAGGTGTT CGTCGATCTC
TACAATCAGG GTCTGCTCTA TCGCGACAAG CGGCTGGTCA ACTGGGATCC GGGCCTCAAG
ACCGCGATCT CCGACCTCGA GGTCGAGACC AAGGAGGTGC AGGGCAGCTT CTGGCACTTC
TCCTATCCGC TCGCCGACGG ATCGGGTGCG ATCTCGGTCG CCACGACCCG GCCGGAGACG
ATGCTCGCCG ACATGGCGGT CGCGGTGAAC CCCGAGGACG GCCGCTACCG CGCGCTGATC
GGCAAGTCGG TCAAGCTGCC GATCACCGGC CGGCTGATCC CGATCGTCGC CGACGAACAT
GCCGATCCGG AGCTGGGTTC GGGCGCGGTG AAGATCACGC CGGGCCACGA CTTCAACGAT
TTCGAGGTGG GCAAGCGCGC CGGCTTCAAG CCGGCCGACA TGCTCAACAT GCTCGATGCC
GAGGCGAAGG TCGTCCAGAC CGCCGACGGG CTGATCCCCG CCGACTATCT CGGCCTCGAC
CGGTTCGAGG CGCGCAGGAA GGTGGTCGCG GCGATCGAGG CCGAGGGCCG GCTGGAGAAG
GTCGAGGACC GCGTCATCCA GACGCCCTAT GGCGACCGCT CCAACGCGGT GATCGAGCCC
TGGCTGACCG ACCAATGGTA TGTCGATGCC GAGACGCTGG CCAAGCCCGC GATCGAGGCG
GTGCGATCGG GCGCGATCAG GGTCGTCCCC GAAAGCTGGA CCAAGACCTA TTATAACTGG
CTCGACAACA TCCAGCCCTG GTGCGTCTCG CGCCAGCTCT GGTGGGGCCA CCAGATCCCG
GCCTGGTACG ACGCCGACGG CCAGGTCTAC GTCGCCGAGG ACGAGGCGGC CGCGTCGGCG
CTCGCCGGCG GCAAGGCGCT GACCCGGGAT TCCGACGTGC TCGACACCTG GTTCTCCTCG
GCGCTGTGGC CGTTCGGCAC GATCGGCTGG CCCGACCAGG CCGGCCAGCA GCCGCCCGAG
GCCTATCAGG CGGGCGCCGC CGGCAAGGCC TCGAAGCTCC AGCGCCACTA TCCCAACGAC
GTGCTGATCT CGGGCTTCGA CATCCTGTTC TTCTGGGACG CCCGCATGAT CATGCAGGGC
CTGCACTTCA TGGGCGAGGT GCCGTTCCGC ACCCTCTACC TGCACGGATT GGTCCGCGCG
GCGGACGGGT CGAAGATGTC GAAGTCGAAG GGCAACACGG TCGATCCCCT GGGCCTGATC
GACAAGTACG GCGCCGACGC GCTGCGCTTC ACGCTGACCG CGATGGAGAG CCAGGGCCGC
GACATCAAGC TCGACGAGAA GCGGGTCGAG GGCTATCGCA ACTTCGCGAC CAAGCTGTGG
AACGCGGCCC GCTTCGCGCA GGGCAACGGC ATCGGCGCGT CGACGACGAT CGAGCCGCCG
GCGGCCGAAC TGGCGGTCAA CCGCTGGATC ATCGCCGAGA CGGTCAGGAC GGTGCAGGCG
CTCGACCTCG CCATCGCCGA CCTGCGCTAC GACGAGTCCG CCAACACGAT CTACCAGTTC
GTCTGGGCGA GCTTCTGCGA CTGGTATCTG GAGCTGATCA AGCCGGTCCT CGCCGAGGGC
GCCGACCAAG GGCAGGCGGC CGAGACGCGC GCGGTCGCGG GCTGGGTGCT CGACCAGATC
CTGGTCATGC TCCACCCGTT CATGCCGTTC ATCACCGAGG AGCTGTGGCA CGCCCTCGGC
CGGCGGGATT ACGACATCAT CGTCGCGAAA TGGCCGATGG CCGATGCGCG CGCGATCGAT
CCGGCGGCGC AGCAGGAGAT CGACTGGCTG ATCCGCATGG TGGGCGAGGT CCGCGCGGCG
CGCACCGGCC TCAACGTGCC ACCGGGCGCG CGGCTGCCCG CTTATGCGCG CGGCGCTTCC
GAGGAGACCC GGCGGCGGCT CGCGGCGAAC GCGGTGGCGA TCGCACGGAT GGCGCGGATC
GACCTGGCCG AGGGCGAGGC CCCGGCCGGC GGCGCGGCGC AGGTCGTCGT CGACGAGGCG
ACCTATGTGC TGCCGCTCGA AGGGGTGATC GACCTCGATG CCGAGCGGGC GCGCCTCGCC
AAGGGCATCG CCGCGGCCGA GAAGGAGCGC GACGGCCTCG CCGCCCGCCT CGGCAACCCG
GCCTTCGTCG AGAAGGCGAA GCCCGAGGCG GTCGAGAAGG CGCGCGCCGA CCATGCCGAG
AAGAGCCTGG AGGCCGAGCA GCTCGGCGCC GCGCTCGCCC GTCTGGGCTG A
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| Protein sequence | MTIDKTFDPA AIEARWYAHW EDNGLFRPER PEAEPYTIVI PPPNVTGSLH IGHALDDTLQ
DVLIRHARLK GKDALWVVGT DHAGIATQMV VERQLDAKGQ KRTDFTREQF IAKVWEWKEE
SGGTITRQLR RLGASCDWAN ERFTMDEGFS KAVLKVFVDL YNQGLLYRDK RLVNWDPGLK
TAISDLEVET KEVQGSFWHF SYPLADGSGA ISVATTRPET MLADMAVAVN PEDGRYRALI
GKSVKLPITG RLIPIVADEH ADPELGSGAV KITPGHDFND FEVGKRAGFK PADMLNMLDA
EAKVVQTADG LIPADYLGLD RFEARRKVVA AIEAEGRLEK VEDRVIQTPY GDRSNAVIEP
WLTDQWYVDA ETLAKPAIEA VRSGAIRVVP ESWTKTYYNW LDNIQPWCVS RQLWWGHQIP
AWYDADGQVY VAEDEAAASA LAGGKALTRD SDVLDTWFSS ALWPFGTIGW PDQAGQQPPE
AYQAGAAGKA SKLQRHYPND VLISGFDILF FWDARMIMQG LHFMGEVPFR TLYLHGLVRA
ADGSKMSKSK GNTVDPLGLI DKYGADALRF TLTAMESQGR DIKLDEKRVE GYRNFATKLW
NAARFAQGNG IGASTTIEPP AAELAVNRWI IAETVRTVQA LDLAIADLRY DESANTIYQF
VWASFCDWYL ELIKPVLAEG ADQGQAAETR AVAGWVLDQI LVMLHPFMPF ITEELWHALG
RRDYDIIVAK WPMADARAID PAAQQEIDWL IRMVGEVRAA RTGLNVPPGA RLPAYARGAS
EETRRRLAAN AVAIARMARI DLAEGEAPAG GAAQVVVDEA TYVLPLEGVI DLDAERARLA
KGIAAAEKER DGLAARLGNP AFVEKAKPEA VEKARADHAE KSLEAEQLGA ALARLG
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