Gene Swit_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1083 
Symbol 
ID5200371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1214090 
End bp1215490 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content65% 
IMG OID640580628 
Productaldehyde dehydrogenase 
Protein accessionYP_001261587 
Protein GI148554005 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA TCTTCACCCG CCGGAACCCC GTAACGGGCG AGGTCGTGAC CGAAGCGAAG 
GCGTTCAGCG TCGCGGATGC GAACAGCGCC GTGGATGCCG CTGCCGCCGC CTTTCCGATC
TGGTCGACGC TCGGCCCCAA TGCTCGGCGA GCAGCACTCG CCAAAGCGGC CGAAGCGCTT
GCGAGCAGGC GTGATGCCTT CATCGAGGCG ATGCAGGACG AGATCGGGGC GACCGAAGGC
TGGGCGCATT TCAATTGGAA GCTCGCGGTC GACATGGTCC GCGAGGCGGC CGCCCTTACG
ACGCAGATCG GAGGCGAAGT CATCCCGTCC GACAAGCCCG GCTGTATCGC GATGGCGGTA
CGGGAACCGG TTGGCGTGCT GCTCGGCATC GCGCCGTGGA ACGCACCGAT CATCCTCGGC
GTCCGGGCCG TCGCGACCCC GCTCGCCTGC GGCAATACCG TGGTGCTGAA GGCCAGCGAG
CAATGCCCCC GCACCCACAT GCTGATCGCA GAAGCATTCG CCGAAGCACT ACCCGCCGGT
GCGGTCAGCA TCGTCACCAA CGCGCCCGCC GATGCATCGG AGATCGTCGG CGTGTTGATC
GACCATCCAC AGGTCCGCCG CATCAACTTC ACGGGCTCGA CGGCGATCGG CAAGATCATC
GCCCAGCGCG CGGCCGGCCA TCTCAAGCCC GTGCTGCTCG AACTGGGCGG CAAGGCGCCG
ATCCTGGTCC TCGAGGATGC CGACCTCGAC GAAGCGGTCA AGGCAGCGGC ATTCGGCGCC
TTCATGAACC AGGGGCAGAT CTGCATGTCG ACCGAGCGGA TCATCGTCGT CGAGGCGGTG
GCCGACGCAT TCGTCGAGCG ATTCAAGGCC AAGGTCGACA CTATGGCGGT CGGCGATCCG
CGCGAGGCCG AGACGGCGCT CGGCGCCGTC ATCGATCGAA AAACGGTCGA GCACGTACGG
TCGCTGATTG ATGACGCGAC TCAAGCCGGG GCGGTGCAGA TAAATGGTGG CGATGCCGAT
GGCGTTTTGA TGCCCGCCCA TGTCGTTGAT CATGTAACGC CTGAGATGAA GCTGTTTCGC
GACGAGGCCT TCGGCCCTGT CGTCGCGGTG ATCCGCGCGC GCGACGAGCG TCACGCCATC
GCGCTCGCAA ACGACACCGA ATACGGCCTC TCCGCTTCCG TCTTCACCCG CGACACCGCG
CGCGGCCTGA CAGTCGCCCG GCAGATCAAG TCGGGCATCT GCCACATCAA CGGTCCGACG
GTACATGATG AGGCCCAGAT GCCGTTTGGC GGGGTCAAGG CTTCGGGCTA TGGCCGCTTC
GGCGGTAAGG CAGGGATCGA TGCCTTCACC GAGCTGCGCT GGATAACGAT AGAAACTGAG
CCCGGCCATT ATCCGATTTG A
 
Protein sequence
MTQIFTRRNP VTGEVVTEAK AFSVADANSA VDAAAAAFPI WSTLGPNARR AALAKAAEAL 
ASRRDAFIEA MQDEIGATEG WAHFNWKLAV DMVREAAALT TQIGGEVIPS DKPGCIAMAV
REPVGVLLGI APWNAPIILG VRAVATPLAC GNTVVLKASE QCPRTHMLIA EAFAEALPAG
AVSIVTNAPA DASEIVGVLI DHPQVRRINF TGSTAIGKII AQRAAGHLKP VLLELGGKAP
ILVLEDADLD EAVKAAAFGA FMNQGQICMS TERIIVVEAV ADAFVERFKA KVDTMAVGDP
REAETALGAV IDRKTVEHVR SLIDDATQAG AVQINGGDAD GVLMPAHVVD HVTPEMKLFR
DEAFGPVVAV IRARDERHAI ALANDTEYGL SASVFTRDTA RGLTVARQIK SGICHINGPT
VHDEAQMPFG GVKASGYGRF GGKAGIDAFT ELRWITIETE PGHYPI