| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1082 |
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| Symbol | |
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| ID | 5200370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1212458 |
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| End bp | 1214011 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640580627 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_001261586 |
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| Protein GI | 148554004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC ATCTCAAAAG CCTTTATTGC CTGGGAGCCA TGCTGGTCGT CGTCGGCGGC
GGCACCGCCT GGGCGCTGCC CCCCGTCGAA GCGGTCAGTC CTTGCCCCGG GAATGGGGGT
CCCGAAGAGA GTGGCCAGAC GTCCGTGACG GAACATCGCT TCGCGGCCGG TGGGAAGAAT
TTCAGCTATA CCGCCAAGGC TGGAACCATG GTGATCCGCG ACAAGGCGGG CCATCCTACC
GCCGAGATCG GCTACACCTC CTATGCGCGG CCCAGCGTCA AGGGCGGCGC GGTGCGGCCG
GTGATCTTCG CCTTCAATGG CGGCCCCGGA TCGTCGTCGG TATGGCTGCA TGTCGGCATG
CTCGGGCCCA AGCGGGTCGA AGCCAATGAC GCCGGCCCGA CGCCGCTTTC CCGGCTCAAG
GTGGTCGACA ACCCGTCGAC CATGCTCGAC AAGGCGGATC TGGTCCTTAT CGATCCCGTC
GGAACCGGCT TCGGCCGCGC CATTTGCGGC AAGAAGGATA ATGATTTCTG GTCGGTCGAT
GCCGACGCGG AATCGATCGG CCGGTTCATC ACCCAATATC TTGGGCAAAA CGATCTGTGG
GCTGCGCCCA AATATATTCT CGGTGAAAGC TACGGCACGA TCCGGGCAGC GGTCGTGCTC
AACTGGCTTC GTTCGCAGCG GGTCAGTTTC AACGGCGTGA TCATGCTCGG CATCGCCACC
GATATCGAGA TCATCCACAC TCAGCTTCCC GGTAACGACC GGCCCTATCC GGTGTTCGTG
CCGGGTTTCG CTGCAGCGGC CTGGTATCAC AAGCTCGTGC CGGCATCGTC CGGGCCGCTC
GAGCCATTTC TCGAGGAAGC ACGGCGTTTC GCGCTTGGTC CCTATGCGGC CGCACTGCTG
AGGGGCAATG CCTTGCCCGA TGCCGAATTC GACGCGATCG CACGCGAAAT GGCTCGTTTC
ACCGGCCTTT CGGTGGAGTA TGTCAAAGCT TCGAACCTGC GTGTTTCGGA ATTCGCCTAT
GGCCAGGAGG CGATGCGCGC GCGGGGCAAG ACGATAAGCC GGCTCGATTC ACGTTATGTC
GGCGATACAC AGGACACCAC GCAGAAGCTG GTCGACTATG ATCCGATCTT GTCGTTCCTC
GGCACGGCCT ACACCACCGC GTTCAACGAT TATTATCGCC GCGACCTCAA GGTCGGGATC
GACCGGTCCT ATAATATCCT CAACGACGAT GCCGGCTGGA AGTTCGACAT GACGCACCAG
CCGATCGGCG CGCCGCCGGA CTATGCCCAG CCCATCGTGA ATGCGAATGT CGATCTCGCG
ACCGTGATGA CCCAGGATCC CAATCTGCGC ATGCTGGTGC TGGCAGGCTA TTTCGACCTT
GGCTCAACCT TTACCGCGGC CGAATATATG GTCGCCCACA TCCAGATGCC GCAATCCGCG
CAATCTCGCA TCTCGATGAA ATACTATATG TCCGGCCACA TGATCTACGC GCATGAGCCA
TCGCTTCGAC AGATGAAGAA GGACATCGAT CAGTTCATGG CTGCAGGTCA ATAG
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| Protein sequence | MNKHLKSLYC LGAMLVVVGG GTAWALPPVE AVSPCPGNGG PEESGQTSVT EHRFAAGGKN
FSYTAKAGTM VIRDKAGHPT AEIGYTSYAR PSVKGGAVRP VIFAFNGGPG SSSVWLHVGM
LGPKRVEAND AGPTPLSRLK VVDNPSTMLD KADLVLIDPV GTGFGRAICG KKDNDFWSVD
ADAESIGRFI TQYLGQNDLW AAPKYILGES YGTIRAAVVL NWLRSQRVSF NGVIMLGIAT
DIEIIHTQLP GNDRPYPVFV PGFAAAAWYH KLVPASSGPL EPFLEEARRF ALGPYAAALL
RGNALPDAEF DAIAREMARF TGLSVEYVKA SNLRVSEFAY GQEAMRARGK TISRLDSRYV
GDTQDTTQKL VDYDPILSFL GTAYTTAFND YYRRDLKVGI DRSYNILNDD AGWKFDMTHQ
PIGAPPDYAQ PIVNANVDLA TVMTQDPNLR MLVLAGYFDL GSTFTAAEYM VAHIQMPQSA
QSRISMKYYM SGHMIYAHEP SLRQMKKDID QFMAAGQ
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