| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1078 |
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| Symbol | |
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| ID | 5199656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1206799 |
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| End bp | 1207818 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580623 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001261582 |
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| Protein GI | 148554000 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.235288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAGCG GCGCCCACAT TCCTGACCCT GAGCAGGACC GTATCGACAT GCAGGCGAGC
GAGTGGGTCG TGCTGCAGGA TGATCGCGAG CTGACCGCGG CCGAGCAGGA CGATTTCGAT
CGTTGGCTCG CCGCCGATCC GCGCCATGCC CGCGCGTGGC AAGACCTATC GCGCACATGG
TCGACATTGC CCGTTCTCAA CAAGCTGTCC GAGCTGGCCA CCGATCCGAT CGATGTCACC
CCCGAGGCGA CACGGCATCG TTGGGGCTAT GTCCGCGTGC CGAAGATCGC GCTCGGCGTC
GCCGGCGCCG TGGCGGCCAT GGTCGCGTTC CTCGCCGTCG GACCATCCTT GCTCCCGCAA
CCGGAGGTCT TTCAGACCGG TGTGGCGCAG ACCCAGCTCC TGACGCTCGA CGATGGCAGC
CAGGTCACGC TCGGTCCACG CTCGCGGTTG ACGGTGGCCT TCGCGGACGC GGAGCGACGC
GTCGTGCTGG CCAGTGGCGA AGCGTTCTTC GAAGTCACCC ACGACCGATC GCGTCCATTC
CTGGTCGAGG CCGGCGGATC GACCACCCGC GTCGTGGGGA CCAAGTTCGA CGTGAACTAT
GCCGACACTT CGGTGCGCGT CGGCGTGCTC GAGGGGCGCG TGCAGGTCAG CCGGGCCGAT
CCCGATCCAG CCAGGCGTCC GGCGACGGCC CTTCTCCAGG CCGGGCAGCG CGCCGAGATT
CGCCTGGCTT CGGCCGCAGA CCCGCTGATC GTCCGACTGT CAGCCCCCAT GCCGGGCGCA
TGGCGGCAAG GGCGGCTGGT TTATGAGAAT AGCCGCCTGT CCGATCTGGT GTCGGACGTG
AACCGCTATT ACGCGCCCGG CGTCATCGTC GCCGACAAGG GCATTCTCGA TCTGCGCGTC
ACGGCATCGT TCAAGGCGAG CGAGATCCCG GCCTTCCTGG CATCGGTCGG GACGGTGTTG
CCGGTGAAGG CGACCGAGAC GGCGGGCGGC GCTTACCGTC TGGAAGCCAC CGGTCGATAG
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| Protein sequence | MNSGAHIPDP EQDRIDMQAS EWVVLQDDRE LTAAEQDDFD RWLAADPRHA RAWQDLSRTW
STLPVLNKLS ELATDPIDVT PEATRHRWGY VRVPKIALGV AGAVAAMVAF LAVGPSLLPQ
PEVFQTGVAQ TQLLTLDDGS QVTLGPRSRL TVAFADAERR VVLASGEAFF EVTHDRSRPF
LVEAGGSTTR VVGTKFDVNY ADTSVRVGVL EGRVQVSRAD PDPARRPATA LLQAGQRAEI
RLASAADPLI VRLSAPMPGA WRQGRLVYEN SRLSDLVSDV NRYYAPGVIV ADKGILDLRV
TASFKASEIP AFLASVGTVL PVKATETAGG AYRLEATGR
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