| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1076 |
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| Symbol | |
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| ID | 5196801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1202508 |
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| End bp | 1204124 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580621 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_001261580 |
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| Protein GI | 148553998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.231006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG TCAGGCGCTT GTCGCTGCTC GTATCGCTGT CGAGCCTGCT CGCCATGCCG
GCCCTGGTAC AAGCGCAAGA TGCAGCATCT CCAGCGCTCT CCCCAGAGCC TTCCAGGTCG
ACATGGCCTG CCGTCACCCG CCCGGCCGAC CGGGGGCCGC GCCACTATTC GGCGGTGCGC
AGCGGCACCT TTGGCGGCAA GAGCCTGCGC TATCGGGCCG TGCTGTCCGA GATGCTGGTC
AGGGACCGCG CGGGCAAGCC GGCATCGAGC CTGTTCGTCA CCGCCTTCGT CGCCGGAATC
GACCAGAGGC TCGCGGCCCA GCGACCGGTC ATCTTCATCT TCAATGGCGG GCCAGGCGGC
TCCTCCAACA CATTGATGTT CGGCGCCATG GGGCCTTCAC GGTTGCAGGC GTTCGACGTG
GCCGCGATCG GCAATGCCAA GACACCGGTG GTGCCGAACG AGGATGCCGT CCTCGACATA
GCCGATCTCG TCTTCATCGA CGCGCCTGAA ACGGGTTATG GGAGGCCCCT GCCGGGGAGC
GACGAAAAGA CCTTTCGCTC GAACGACGGG GATTCCAATG CCTTCGCGCA GGTGATTCTG
CGCTGGCTCA CCGACAATGG CCGCATGGCC TCGCCCGTTT ACATCATGGG CGAAAGCTAT
GGGTCCATCC GCGCGGTGCT GCTCGCGCGC GATCTTCGAG TGGCGACGCC GCGTGTCGAG
CCCGCAGGCC TGATCCTGGT ATCCCAGGCT CTGTGGTACA ATGGGCCAGA GACCGGCATG
ACGGTGCTTC CCGATCCCGT CCGTGCGGTC AACAGCCTGC CCGATATTGC GGCGCTGGCC
TGGCATCATG GTCTCATCGA CAACAGGACG CAGACGCTCG AGCAGGCGGT GCGGGCCGCC
CAGACCTTTG CACTCCAGGA TTATGCCAAG ATACTGATCG CGGGAAACCG CGCTCCCGAA
ACGGAGCGGG CCTGCGTTGC CGAGCGGCTC GCACAGTTGA CCGGCGTGCC GGCCTCGACC
TGGCTCGCCG GCTCGTTGCG GCTGTCCAAT ATCCGACGGC AGATGCTTGC CGGCCGTAAC
CTGGCGCTGG GACAGTTCGA CGGCCGCGAG ATCGAGCCGT TGCAGGGTAT CGTCGACGAT
TCACATCGCG ACTTCAAGGC GATGATGGCT GGGCTTACCG CGGCAACAGG GCAGTTGCGT
CGAGACCTGT TCCACGCCGA AGGACTGCCC GACTATCGTT CGACCGTCGA CAGTCCGCCG
GCGTTCGAGG AGACCTGGAC GTTCAACAAG GCACCGATGC CCGGCACCGA GATCATCCTG
CGCGAGCAGA TGGCGGCCAT GCCCAAGATG CGGTTGATGG TGACGCAAGG CGTCTTCGAC
ACCACAACCA CCATGGGCGA GACCGATTAT CAGTTCGCCC AGATCGCCGC GCCGCAGGAC
CGTACGACCT TCGCTTATTA TCCCGGCGGA CATATGCTCT ATTCCGAGGA TGAGGGGCGA
CGCGCCTTCC TGAGCGACGT TCGAACCTTC ATCAGCGGCC AGGTGCTGGC TCGGAGGCCC
TTCCCGCACC CGGCACCAGG CCAGATCGGC GGGCGCAAGC AGGCGACCGG GCAATGA
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| Protein sequence | MKIVRRLSLL VSLSSLLAMP ALVQAQDAAS PALSPEPSRS TWPAVTRPAD RGPRHYSAVR
SGTFGGKSLR YRAVLSEMLV RDRAGKPASS LFVTAFVAGI DQRLAAQRPV IFIFNGGPGG
SSNTLMFGAM GPSRLQAFDV AAIGNAKTPV VPNEDAVLDI ADLVFIDAPE TGYGRPLPGS
DEKTFRSNDG DSNAFAQVIL RWLTDNGRMA SPVYIMGESY GSIRAVLLAR DLRVATPRVE
PAGLILVSQA LWYNGPETGM TVLPDPVRAV NSLPDIAALA WHHGLIDNRT QTLEQAVRAA
QTFALQDYAK ILIAGNRAPE TERACVAERL AQLTGVPAST WLAGSLRLSN IRRQMLAGRN
LALGQFDGRE IEPLQGIVDD SHRDFKAMMA GLTAATGQLR RDLFHAEGLP DYRSTVDSPP
AFEETWTFNK APMPGTEIIL REQMAAMPKM RLMVTQGVFD TTTTMGETDY QFAQIAAPQD
RTTFAYYPGG HMLYSEDEGR RAFLSDVRTF ISGQVLARRP FPHPAPGQIG GRKQATGQ
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