| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1071 |
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| Symbol | |
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| ID | 5199726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1196680 |
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| End bp | 1197825 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640580616 |
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| Product | fumarate lyase |
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| Protein accession | YP_001261575 |
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| Protein GI | 148553993 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.137268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TGTTGCGCGT TCGTCCCGCC GCCACTCCGG CGATGCTGGC CATTTTCTCC
GACGCGGCAG TGATTCGTCA TGCGCTGCGG TTCGAGGCGG CGCTGGCCTG CGCCCAGGCC
GCCGAGGGCC TGATCGGGAA AGGCATCGCC GATGCCATCG CCGATCTGTG CGGCGGTGCC
GGGATCGATC CCGCCGACCT GGCGGAGCGG GCGACGCTGG CCGGGACGCT CGCGATTCCG
CTTCTGGCCC TGTTGCGGGC CGAATTGCCG CCGCCCGCCG CCGAGGCGCT CCATCGCGGC
GCCACGAGCC AGGATCTGGC GGATACGGTG CTGATGATGC AGGTCGTGCA GGCGACCGCG
CTGCTGGCGG TCGATCTCGA TCGCGTCCGC ATGGCGCTCC ACGCCCTGGC CGAACTCCAT
GCTGCGACGC CGGCGATAGG GCGCACCCTT CTGCAGGATG CCGTGCCGAT CGGCTTCGGC
CTCCGGCTCG CCCAGGCGGC GGCGGGGGTC GGCGATGCCG GGCGGCGATT GGAAGGCGAG
GTCGCGGTCC ACGCGAGGGT CCAGCTCGGC GGACCGGCGG GAAGCCGCGC CGGTCTTGGC
GGGAAGGGGG CCGCGATCGC CGCACGGATG GCCGGCGAAC TGGGGCTGGT CGCGGGTGTG
CCGTGGCATG CGAACCGCAC GGGCGTGGCG GCGATTGCCG CGGCGGTGGG GATCGTGATC
GGAGCGCTCG CCAAGCTGGC ACGGGATATC TCGCTGCTGG CCCAGAACGC GATCGGCGAA
GTCCGGGAGC CCGCCATTCC GGGGCGGGGC GGCTCCTCGT CTATGGGCCA TAAGCGCAAT
CCGACCGGAT GCCAGGTCGC GCTGTCGGCG GCGATCCGCG CGCCCGGCCT GGTCGCCGCT
GTCCTCGCCG CCTTGCCGGC CGAGGAGGAG CGCGGCCTCG GCGGATGGCA GGCGGAGGGG
CCGGCGCTGG CGGATTTGTT CCTGCTCGCC GCAGGAAGCG CGGCGGCCAT GGCGGATGTC
GCGGAAGGGC TGGAGATCGA CGAGGCGGCG ATCGCCCGCA ACCTGGCGGC GGCATCGGTG
GTGGACGGCA TCGGCGAAAG CGCGGCGATC GTTTCCGCGA TCCTCGCCCA GTATCGAAAA
GGCTAG
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| Protein sequence | MSDLLRVRPA ATPAMLAIFS DAAVIRHALR FEAALACAQA AEGLIGKGIA DAIADLCGGA
GIDPADLAER ATLAGTLAIP LLALLRAELP PPAAEALHRG ATSQDLADTV LMMQVVQATA
LLAVDLDRVR MALHALAELH AATPAIGRTL LQDAVPIGFG LRLAQAAAGV GDAGRRLEGE
VAVHARVQLG GPAGSRAGLG GKGAAIAARM AGELGLVAGV PWHANRTGVA AIAAAVGIVI
GALAKLARDI SLLAQNAIGE VREPAIPGRG GSSSMGHKRN PTGCQVALSA AIRAPGLVAA
VLAALPAEEE RGLGGWQAEG PALADLFLLA AGSAAAMADV AEGLEIDEAA IARNLAAASV
VDGIGESAAI VSAILAQYRK G
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