| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1066 |
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| Symbol | |
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| ID | 5197272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1188300 |
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| End bp | 1190834 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580611 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261570 |
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| Protein GI | 148553988 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.308413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.134897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC GCAGGAGGCT GCTCGCCTCG CTTTGTCTTT CGCCGCTGAT GTGGGGGATG
GCGGCGCCCG CATTCGCCGA GGCCGCGGCG ACGCCCGTCG CCGACGACGG CGAGATTCTC
GTCACCGCCC GCCGCGTCGA GGAAAAGGTC CGCGACGTTC CGGCCACCAT CAGCGTCCTG
ACCGAAAGCG CGATCCGCGC CTCGGGTGTC ACCGTCGCCA CCGACTTCGT CCAGCTGGTG
CCCGGCGTCA CGATCGTCAC CGGCAATGTC GAGGCGGGCG ACGTGCAGAT CAGCGTACGC
GGCCTGAACG GCACCCGCGA CGCCGAAAGC AACGTCGCGC TCATCGTCGA CGGCATCCTC
AAGACCAACA CCGCGGCGCT CAACCAGAAT GCCGGCACGC TCAGCCAGAT CGAGGTGCTC
AAGGGGCCGC AGGGCGCGAT CTACGGCCGC AACGCGGCGG CGGGCGCGGT GATCCTGTCG
ACCCGCAAGC CGGGCGACCG GCTCGAGGGG CAGGCGACCG TCAGCTACGC CGAATATGAT
CACAAGCGCG CGGCGGGCTA TCTGTCCGGC CCGCTCGGCG CCGGCGTCGG CCTGCTCGTG
TCGGGCGACT ATGAAAAGGG CAACGGCTTC TACAAGAACG TCTTCCAGGG GACGCCGGCT
TTCGATGCCT ACAAGGCCGC GATCCTGTCG GTCACGCCCG GCGTCGACGT GCCCGGCTTC
AGCCGTCACT CGGTCGACAA TTTCCTGCGC TGGAACGTCA ATGCCCGGCT GACCGCCGAT
CTCGGCGACC GCACCTCGGT CGACATCAAG GGCAAATATG GCCGGGTCGC CGGCGGCACC
GTCGTCTTCG GCGCGGCCTA TGCGATCCCG GGGCTCGTCC CCTTCGTCGG GCCGGCCGCC
TATCTCGACG TCAACGACTA TGACTTCACC AATGCCTTCC AGGGCAACCT GAAGTCGCGT
CAGGTGCAGA TCACCAAGGA AGTCTCGGTC AAGCTCACCC ATGACATGGA CTGGGCGAGC
CTCCAGGCCT GGGCCGCCTA TAGCGACATC GCCAACAGCT ATACCGGCGA AGGCACGTCC
GGCTCCAACG GCTATTTCTT CCCGCAGGCG CAGTGCCGCG CGACCACCGC CGCGCTCGCC
GGGTTCCCGA CGCCGGCGCC GACCTTCATC GGCGGCACCC CGGAAACCTC CTTCTTCGCG
CCCTATTCGC CGACGACCTG CGACGGCTAT CAGTTCAACA AGCGCAACCA GACCGACTTC
AGCGCGGAGT TCCGGATCGC CTCGCTGCCG GGCAGCGACC TGTCCTGGCT GGCCGGCGGC
TATTATCTGC ACATCGATCG CCACATCTGC GTGAACCTGG CCACCGACAC CGGCCAGGGG
GCGATCCGCC AATGCTTCAC CCTCGATCCG CGCAGCCGGA CCGAGGCGCT GAGCGACGAC
AAGTTCAAGA CCAACGTCTA CGCGATGTTC GGATCGGTGC AGAACAAGTT CTCCGACAGC
TTCACCGCAT CGCTGGCGCT GCGCTACGAC CGTGAGGAGC GCGCCGTCCG CAACCAGATC
CCGACCGACG TCCGCACCCT TTTCGTCAAT CCGCAGGGCA ATGGGCAGGG CGGCTATTAT
CTCAATCCCG GCCTCGACCC CGTCTACAAC CCCAGCGGCG TCCTGCCGCC GCGATCCAAG
GCGTTCGAAC AGGTCGAGCC CAAGCTCAGC CTGACCTACA AGCCGTCCGA GCAGCTGACC
CTGTTCGGCA ACTGGGGCAT CGGCTTCAAA TCGGGCGGGT TCAACAGCGG CGGCAGCGCC
GCGATCGTGA ACACCTTCAA CGGGCCGCCG CTCAACGCGA ACATCACCGT CCGCGACGAT
TACAAGAAGG AGGTGTCGAG CGCGTTCGAG GCCGGCTTCA AGTCGGCGCT GATGGGCGGC
AGGCTCAGCA TCGAAGGCGC GCTTTACTAT ACCGACATCA AGGACATGCA GTTCTTCGAA
TTCTATGTCG GTTCCTTCGG TCTGCTGCGG GTCGTGTCCA ACATCGACAA GGCGCGGCTC
TACGGCGGCG AGCTTTCGGT GAGCATCCGG CCGGTGCGCG GCTGGACGCT GTTCGGATCG
GGCAACGTCA CCGACAGCAA GATCCGCAAG AACAGCTCGC GGCCCGACAC CGTCGGAAAC
AAGGTGCCCT ATGCGTCGGA CTATACGCTG AACCTCGGCA GCCAGCTCGA CATGCCGGTG
AGCGGCGGCC TGCGCGCCAT CGGCCGGGTC GACTACCGCC TCACCGGGCC GACCTGGTTC
CATTCGGTGC AGGCCCAGAC CCGGCCCTCG CTCAACGGGG TGGCCGATTT CTCCAGGAGC
CGGCGCGACG CTTTCGGTAT CGTCAACCTG CGCGCGGGGA TCGCCACCGA TCATTGGTCG
TTGACGGCCT TCGCCAACAA TCTGACCGAC AAGAAATGGA TCAACGAGGT CGTGCCCGCG
CCCGAGCTCG GCGGTTCCTT CGTCTCGCCG GGCACCCGGC AGCAATTCGG TCTCGAACTG
TCGGCGAAGT TCTAG
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| Protein sequence | MTARRRLLAS LCLSPLMWGM AAPAFAEAAA TPVADDGEIL VTARRVEEKV RDVPATISVL
TESAIRASGV TVATDFVQLV PGVTIVTGNV EAGDVQISVR GLNGTRDAES NVALIVDGIL
KTNTAALNQN AGTLSQIEVL KGPQGAIYGR NAAAGAVILS TRKPGDRLEG QATVSYAEYD
HKRAAGYLSG PLGAGVGLLV SGDYEKGNGF YKNVFQGTPA FDAYKAAILS VTPGVDVPGF
SRHSVDNFLR WNVNARLTAD LGDRTSVDIK GKYGRVAGGT VVFGAAYAIP GLVPFVGPAA
YLDVNDYDFT NAFQGNLKSR QVQITKEVSV KLTHDMDWAS LQAWAAYSDI ANSYTGEGTS
GSNGYFFPQA QCRATTAALA GFPTPAPTFI GGTPETSFFA PYSPTTCDGY QFNKRNQTDF
SAEFRIASLP GSDLSWLAGG YYLHIDRHIC VNLATDTGQG AIRQCFTLDP RSRTEALSDD
KFKTNVYAMF GSVQNKFSDS FTASLALRYD REERAVRNQI PTDVRTLFVN PQGNGQGGYY
LNPGLDPVYN PSGVLPPRSK AFEQVEPKLS LTYKPSEQLT LFGNWGIGFK SGGFNSGGSA
AIVNTFNGPP LNANITVRDD YKKEVSSAFE AGFKSALMGG RLSIEGALYY TDIKDMQFFE
FYVGSFGLLR VVSNIDKARL YGGELSVSIR PVRGWTLFGS GNVTDSKIRK NSSRPDTVGN
KVPYASDYTL NLGSQLDMPV SGGLRAIGRV DYRLTGPTWF HSVQAQTRPS LNGVADFSRS
RRDAFGIVNL RAGIATDHWS LTAFANNLTD KKWINEVVPA PELGGSFVSP GTRQQFGLEL
SAKF
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