| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1063 |
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| Symbol | |
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| ID | 5197269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1183380 |
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| End bp | 1185722 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580608 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261567 |
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| Protein GI | 148553985 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0659178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGT TTCTCCGGGG CGCGACGCGC GTCCTGGGAA CGGCGACGAT CGCCTTCTTG
ACATCCACCA GCGCGACCGC ACTGGCCCAG ACGGCCACCC CGCCGACCGC GCCCGACCAG
GCCGGGGACC GGCAGGGCCA GGCCGCCGGG CTCGAGGACA TCGTCGTCAC CGCGCGGCGC
GTCAAGGAAT CGCTGCAGGA GACGCCGGTC GCGGTGACCG CCTTCTCCGC GGCCGCGATC
GACCGCAAAT TCGCCACCGA CATCCGCGCG CTCGCCGGCG ACGTGCCCAA CGTCGTCATC
ACCAACGTGC CGGGCTTCAA CGCCGCCTCG ATCGGCATTC GCGGCCAGTC GACCGGCGAC
ATCATCCTGA CCTTCGAGCC CGCGGTCGGC GTCGTCGTCG ACGATTTCGT GCTCGCCCAT
GTCCAGACCC AGCTGTTCGA CCTGTTCGAC ATCGACCGGA TCGAGGTGCT GCGCGGCCCG
CAGGGGACTC TGTTCGGCAA GAACACCGTC GGCGGCGTCG TCAACGTCAT CACCAAGCGG
CCCGAGAAGG ATTTCGGCGG CGAGCTGCGG CTCGGCTATT CGAGCTTCCG GACCAAGGAC
GTCAAGGCGG CGATCAACAT CCCGCTGTCC GACAACCTGT TCTTCCGCGC CGCCGGCTCC
TTCCAGGAAA GCGACGGCTA TTATCGGCTG ACCAAGACCA ACAATGTCGA CTTCATCCCG
GTCGACGTGC CGGCGCGCGG CCAGCGCTGG GGCGGCACCC GCTATTTCAG CGGCCGCGCC
AAGCTGCTGT GGGAGCCGGG CCCCGACACC AACGTGCTGC TGACCTACGA GATGCTGCGC
GACCGGGGCG ATTCCCCGCC CAGCGTCAAC GAGACGCCGA AGGGCTTCCT GTTCGACGTG
GTCGGCTTCC CCGGCATCCA GACGACCGGC GGCAGCCCGT TCGACACCGG CACCACGCTG
TGCCGGGGCG ACATCAACGC GGCGACCTGC CCGGGCACCC TGCTCGGCCA CCGCATCGAC
GTCGACGGCG GCTATCTGCG CGTCGAGCAC AGCTTCCCCG ATGTCGGCGC GCTGACCGTG
GTCGGCGGCT ATCGGCGGGT GAAGTCGATC CTGCCGTCCG ACTATACCGG CGAAAGCGCC
TATCTGTTCG TGTCGACCCG CGACGACGTG CGCGAGCAGT ACAGCGTCGA GGCGCGCTTC
TCGTCCGACT TCTCGGACCG GATCAAGTTC ACCGCCGGCA CCATGTACTG GGGCCAGACG
CTCGACGCCA AGGCGACCTC GTTCCTCGGC TTCCTGCGCT TCCTGGGCGA TCCCACCGCG
CTCACCGATC CCAACCAGTC GACCGCCAAC TACAAGGTCG ACAGCTATGC GGCGTTCGGC
GAGGCGGAAT ACAAGGTCAG CGATCCCTTC GCGCTGTTCC TCGGCGGGCG CTACACCAAG
GAGAAGAAGA GCTTCTCGGT CCGGCCGCAG GTGCGCCGCT CGACCATCGC GACCGGCTTC
TGGCCCGAAT ATTCGGACAG CGCCAGCTTC TCCAAGCCCA CCTTCCGCGC CGGCTATCGC
TGGCAGATCG CGGACGGGAT CAACAATTAT TTCACCTACA GCCAGGGCTA CAAGTCGGGC
GGCTACAACG AGCAGGCGAT GTCCGCCACC TCGGCGCTGC CGTTCAAGGA GGAGACCGCC
GACAGCTTCG AGCTGGGCCT GAAGACCGAG ACGGCCGACC GCCGCCTGCG CTTCAACGCC
GCGGCCTTCT ACGTCCGCTA CGACGACCTG CAGCGCGACG CGGTGGTGCC GTTCGTCGAT
CCGATCACCG GCCTGCCGGG ACAGGAGACG CGGACCACCA ACGCCGGCAA GGCCGAGGTC
TACGGCCTCG AGCTGGAGGC GAGCGCGGTG CCCGTCGACG GCCTGACGCT GAGCGCGTCG
CTCGGCTGGC AGAAGGCGAA ATATCTGGAG TTCCTGACCG ACGTGGACGG CGACGGCGTC
AACGACGACG CCTCCAACCT GAAGCTGCGC AACGTGCCGA AATGGACGGC GAACGCCTCG
GCCAACTATG CCTTCCCGCC CACGGACTGG GGCCAGGTCA GCCTCAACGC CGACGTCAAC
TACCAGTCCC AATATGAGTC CGTGACCCTC AACGCCCCCT ATACCCAGGG GCAGGCGCGG
ACCCTGGTCG GGGCGAGCAT CCAGTGGAAC GATCCGTCGG AGCGCTATCG CGTCTCGATC
TTCGGCCGCA ATCTGCTGGA CGAGACCTAC CGCGTCTCGG CCAATTCGGT CGCGGGCCTG
TTCAATTTCA CCAACTATGC TCCGCCCCGT TCCTACGGGA TCGAGCTGGG CGTGAAATTC
TGA
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| Protein sequence | MKEFLRGATR VLGTATIAFL TSTSATALAQ TATPPTAPDQ AGDRQGQAAG LEDIVVTARR
VKESLQETPV AVTAFSAAAI DRKFATDIRA LAGDVPNVVI TNVPGFNAAS IGIRGQSTGD
IILTFEPAVG VVVDDFVLAH VQTQLFDLFD IDRIEVLRGP QGTLFGKNTV GGVVNVITKR
PEKDFGGELR LGYSSFRTKD VKAAINIPLS DNLFFRAAGS FQESDGYYRL TKTNNVDFIP
VDVPARGQRW GGTRYFSGRA KLLWEPGPDT NVLLTYEMLR DRGDSPPSVN ETPKGFLFDV
VGFPGIQTTG GSPFDTGTTL CRGDINAATC PGTLLGHRID VDGGYLRVEH SFPDVGALTV
VGGYRRVKSI LPSDYTGESA YLFVSTRDDV REQYSVEARF SSDFSDRIKF TAGTMYWGQT
LDAKATSFLG FLRFLGDPTA LTDPNQSTAN YKVDSYAAFG EAEYKVSDPF ALFLGGRYTK
EKKSFSVRPQ VRRSTIATGF WPEYSDSASF SKPTFRAGYR WQIADGINNY FTYSQGYKSG
GYNEQAMSAT SALPFKEETA DSFELGLKTE TADRRLRFNA AAFYVRYDDL QRDAVVPFVD
PITGLPGQET RTTNAGKAEV YGLELEASAV PVDGLTLSAS LGWQKAKYLE FLTDVDGDGV
NDDASNLKLR NVPKWTANAS ANYAFPPTDW GQVSLNADVN YQSQYESVTL NAPYTQGQAR
TLVGASIQWN DPSERYRVSI FGRNLLDETY RVSANSVAGL FNFTNYAPPR SYGIELGVKF
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