Gene Swit_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1055 
Symbol 
ID5198757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1176576 
End bp1176815 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content68% 
IMG OID640580600 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_001261559 
Protein GI148553977 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.166087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA TCAAGGTGCT GCTGCCCCAG TTCGGCATGG GCATGCAGGA GGCGGAGATC 
GTCCGCTGGA TCAAGGCGGT CGGCGACCCT GTCGAGGCGG GCGAGCCGCT GCTCGAGATC
GAGGCGGCCA AGACCACGGT CGAGGTGCCG TCGCCCGGCG CGGGGACGCT GACCGAAATT
CTCGCGCAGG AGGGCGATAC CGTCGAGGTG CGCGCCCATA TCGCGACGAT CGCGGCCTGA
 
Protein sequence
MANIKVLLPQ FGMGMQEAEI VRWIKAVGDP VEAGEPLLEI EAAKTTVEVP SPGAGTLTEI 
LAQEGDTVEV RAHIATIAA