| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1040 |
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| Symbol | |
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| ID | 5198246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1157696 |
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| End bp | 1158700 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640580585 |
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| Product | dehydrogenase, E1 component |
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| Protein accession | YP_001261544 |
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| Protein GI | 148553962 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.17615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0753246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGG CAAGGGGAGC GGCCGCGCGG GGCGCGGCGC ACGGACGCAA CGCGCGCGCG
CCGGAGCTGA TCGAGCTCTA CCGGCGGATG GTGACGATCC GCGAGGCGGA GAAGAGCTGC
GGCGCGCTGT TCGCGGCCGG CGAGATACCC GGCTTCATCC ATCTGAGCGA CGGACAGGAA
GGCGTCAGCG TCGGCGTGAT GGCGTCGTTG CGCGCCGACG ACACGATCGC CTCGACCCAT
CGCGGCCATG GCCATGCGCT CGCCAAGGGC CTCGGCCTCG ACGGCTTCTT CCGCGAGCTG
ATGGGCAAGG CCGACGGCGC CTGCAAGGGA CGCGGCGGCA GCATGCACGT CGCCGACCTG
TCGGTGGGGA TGCTCGGCGC CAACGGCATC GTCGGCGGCG GCGTCGCGAT CGCGCTGGGC
AGCGGCCTCG CCCAGAAGCT GCGCGGCGGC GACGGCCTCG CCATCTGCTT CTTCGGCGAC
GGCGCGCTGG CCGAGGGCAT CGTCCACGAA AGCCTCAACA TCGCCCAGCT CAAGCAGATC
CCGATCCTGT TCGTCTGCGA GAATAACGGC TGGTCGGAGT TCAGCCCGAC CTCGACCCAG
GTGACCTTCA CGCTGGAGAA GCTCGCCGCC GCCTATGGCA TCCCCTATGT CGGCGCCGAC
GGATCGGACG TCGAGACGGT GGCGGAGCTG GCCGCCGACG TCGTCGACCG CGTCCGCCGC
GATCGCGGGC CGGCGGTGCT GGAGTTCGCG ACCACCCGCA TCCGCGGCCA TTATGAGGGC
GACGCGCAGC GCTACCGCCA GGACAAGGCG CCGCCGGTCG ACCCGCTGCT GGTGGCGCGC
GCCCGGCTCG ACGAGCGCGG CGTCCCCGCC GCCGAGGTCG AGGCGATCGA GGCGGACATC
CGCGCCGAGG TCCGGCGCGC GGTCGAGGCC GCGCGGCTCA GCCCCGATCC GACGCTCGAG
TCCGCCGCCG AGGAGGTCTA TGCGCCGGTG GAGGCGACGG CATGA
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| Protein sequence | MAEARGAAAR GAAHGRNARA PELIELYRRM VTIREAEKSC GALFAAGEIP GFIHLSDGQE
GVSVGVMASL RADDTIASTH RGHGHALAKG LGLDGFFREL MGKADGACKG RGGSMHVADL
SVGMLGANGI VGGGVAIALG SGLAQKLRGG DGLAICFFGD GALAEGIVHE SLNIAQLKQI
PILFVCENNG WSEFSPTSTQ VTFTLEKLAA AYGIPYVGAD GSDVETVAEL AADVVDRVRR
DRGPAVLEFA TTRIRGHYEG DAQRYRQDKA PPVDPLLVAR ARLDERGVPA AEVEAIEADI
RAEVRRAVEA ARLSPDPTLE SAAEEVYAPV EATA
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