| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1038 |
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| Symbol | |
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| ID | 5198244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1155542 |
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| End bp | 1156732 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640580583 |
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| Product | dehydrogenase catalytic domain-containing protein |
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| Protein accession | YP_001261542 |
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| Protein GI | 148553960 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0395636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0765391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC GCGCGAGCAG CGGCGCCGGC GCGCCGATCG TCATGCCCAA GCTCGGCCTG
ACCATGGCCG AGGGGCTGAT CGCCGAATGG AAGGTCGCGC CCGGCGAGGC GGTCAGCGCC
GGCCAGGTCC TGTTCGTCGT CGAGACCGAC AAGATCAGCA ACGAGATCGA GGCCCCCGCC
GACGGCACCA TCCTCAGCTT GCTGGCCGAG GAAGGCGCGA CGGTCGCGGT CGGCGCGCCG
GTCGCGACCT GGACCGGGCC GGGGCAGGGG ACCGGCGGGA CCGAGCAGCC TCCCGCGCCC
CTATCCGAAC CCGTCGGCGC GCCTCCGGTT GCCGCACCGG CGCGGGGCGA GCGCCGGCTC
TCCACGCCCT TTGCCCGGCG GCTGGCGCAG CAGGCGGGGA TCGACCTTGC CGATGTCGGC
GGCAGCGGCG CGCGCGGGCG GATCAAGGCG CGCGACGTGC AGGCGGCGAT CGATCGACGG
ACGACGGCTC CCGCCGTTTC CGCTCCCGCG CCGCGCGGGC GCGATCTGCG CGCGCTGATC
GCCGCGCGGG TGACGCGCAG CAAGGCGGAG ATCCCGCATT TCTACCTGTC GGCCGATGCG
CGCTTCGACG CGCTGGCGGC GCTGCGCCGC GAGGTCAACG CCGATCCGTC GAGCCCAGGC
AAGCTGAGCG TCACCGCCTT CCTCGGCGCC GCGGTCGGCC GCGCGCTGGC GCTTCATCCC
GAGGCCAATG GCGTGTGGCG CGGCGACCGC GTCGAGCCGC TCGACGCCAT CGCGATCGGT
ATCGCGGTCG AGGCGCCGGG CGGGGTGATG GCGCCGGTCG TGCCGCTCGG CGGCGGCATC
CATGATTTCG CGAGCGCGCT CGACGCGGCG ATCGAGCGCG CCCGGCAGGG GCGGCTCGGG
GCCGCCGACG TCGGCGCGGC GGCGATCGGC ATCTCCAATG TCGGCATGTT CGCCGTCCGC
TCGCTCACCC CGATCATCGA CCCGGACCAG AGCTTCATGC TCGGCGTCGG CGCGCCGCGC
GCCGCCTTCC GCGCCGACGA GAATGGCGCG CCGGTCGCGG TGCGGAAGGT GACGCTCACC
CTCGCCTGCG ACCATCGCGC GATCGACGGG GCGGCGGCGG CGCGTTTCCT GGCGACGATC
GTCGAACTGA TCGAGCATCC GGTGCGGCTG CTCCTTCCCA TCCGGTCATG A
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| Protein sequence | MSDRASSGAG APIVMPKLGL TMAEGLIAEW KVAPGEAVSA GQVLFVVETD KISNEIEAPA
DGTILSLLAE EGATVAVGAP VATWTGPGQG TGGTEQPPAP LSEPVGAPPV AAPARGERRL
STPFARRLAQ QAGIDLADVG GSGARGRIKA RDVQAAIDRR TTAPAVSAPA PRGRDLRALI
AARVTRSKAE IPHFYLSADA RFDALAALRR EVNADPSSPG KLSVTAFLGA AVGRALALHP
EANGVWRGDR VEPLDAIAIG IAVEAPGGVM APVVPLGGGI HDFASALDAA IERARQGRLG
AADVGAAAIG ISNVGMFAVR SLTPIIDPDQ SFMLGVGAPR AAFRADENGA PVAVRKVTLT
LACDHRAIDG AAAARFLATI VELIEHPVRL LLPIRS
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