Gene Swit_1036 details

Gene Information

• Locus tag: Swit_1036
• ID: 5196137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 1153257
• End bp: 1153982
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640580581
• Product: nitroreductase
• Protein accession: YP_001261540
• Protein GI: 148553958
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0710283
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCGCAC TGGCGATAGA CGACGACCTT CCCGACGACG CCCGCGCGCT CGCGCGGCTG 
GTCGCGGAGC GGCATAGCTG CCGGGGGTTC CTGCCGACGC CGGTGCCGCG CGCGACGATC 
GACAGGATGC TGGCGATCGC GCAGGGGTCG GCCTCCTGGT GCAACTCGCA GCCTTGGGAG 
GTCATCGTCA CCGAGGGCGA GGCGACCGAC CGCTTCCGCG AGCAGCTCTA CGCCTTCGCC 
GCCAGCCAGA ACTGGGCCGA CCAGGCCAAC CGCCCCGAGC GGCCCGACTT CCCCTTCCCC 
GCCCGCTATG TCGGCATCTA CAAGGACCGG CAGCGCGCCA CCGGCTGGGC GCTCTACGAG 
GCGGTCGGCG TCGCCTATGG CGACCGGGAG GGATCAGGCC GCCAGATGCT GGAGAATTTC 
CGCCTGTTCG GCGCGCCGCA CGTGATGATC GTCACCACCG AGGAGGACCT CGGCACCTAT 
GGCGCGATCG ACTGCGGCGG CTATGTCGCC CATGTCCTGC TCGCCGCGCA GAGCCTCGGC 
CTCGCCACCA TCGCCCAGGC GGCGCTGGCC GGCGTCGCCG ACTTCGTCCG CGACTGGTTC 
GCCATCCCGG CGCACCGCAA GATCGTCTGC GCGATCTCCT TCGGCTTTGC CGACCCCGCG 
CACCCGGCCA ACGGCTTCCG CACGACGCGC GAGAGCCTGG GGAATGTCGT GCGCTACGTG 
GGGTGA 

 

Protein sequence

MPALAIDDDL PDDARALARL VAERHSCRGF LPTPVPRATI DRMLAIAQGS ASWCNSQPWE 
VIVTEGEATD RFREQLYAFA ASQNWADQAN RPERPDFPFP ARYVGIYKDR QRATGWALYE 
AVGVAYGDRE GSGRQMLENF RLFGAPHVMI VTTEEDLGTY GAIDCGGYVA HVLLAAQSLG 
LATIAQAALA GVADFVRDWF AIPAHRKIVC AISFGFADPA HPANGFRTTR ESLGNVVRYV 
G