| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1034 |
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| Symbol | |
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| ID | 5196135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1150563 |
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| End bp | 1152101 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580579 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001261538 |
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| Protein GI | 148553956 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0790536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCT GGGCGAAGGA TTGGGTGGCC TATCACAGCG CGCTCCGGCC GGAGGCGCCA
GCGGTCACCT GCGTCGAGCG GGGCGTCACC CTGCGCTGGG GCGAGCTCGA CGAGCGGGTC
GGGCGGCTCG CCTATCAGCT CCGCCACCAT TTCGGCCTGC AGCCGGGCGA CCGCGTCGCG
CTGATCGCCG AGAACGACAC CCGCATCTTC GAGGTGCAGT TCGCCTGCAT GCGCGCCGGG
CTGATCTGGG TGCCGCTGAG CTGGCGGCTG GCGGTCGGCG AACTGGTGAC GCTGGTGCGC
GACGCCGACC CCGCGATGCT GATCCAGGAC GACATCTGGC GTGAGGTGGG CGACGCCGTC
GCCGACGCGA CCGGGATCGA GCGGCGGCTC CTCTGGTCGG ACGACCTTGC CCGCAGCGAC
TATGACCGGC TGATCGCCGA CGCGCCCGCC GCGATGCCGG GCGGCGTCCA TGACGAGGAC
CAGCTCACCC ATATCCTCTA CACCTCGGGC ACCACCGGCC TGCCCAAGGG GGCGCTGTGC
AGCTGGGGCA CGCTCAAGCA CCATGCGATC AACGCCGCGC AGACCTCGCG CGCGGCGGAG
CGGGGCAATC ATCATCTCAA CATCGTGCCG CTGTTCCACG CGGGCGGGCT CAACACCTTC
TCCAACCCGA CGCTCTACTG GGGCGGGCAC GTCACGACCA CGCGGCGCTT CGACCCCGCC
GTCGCGCTGC GGCTGCTGAC CGATCCGGCG GTGGGGATCA CCCATTTGTG CGGCGTGTTG
CAGATGTACG AGCTGATCAC CGCGCTGCCG GCCTTCGCCG AGGCGCGCTT CCCGACGCTG
CGCAACGGCC TGTTCGGCGG CTGGGGGCCC AAGACGGTGT GGGTCCACCA GACCTGGCAG
GATCGCGGCT TCTTCCTCCA GCTTTCCTAT GGATCGACCG AGCAGGGGCC GCTGGTGACG
GTGCTCGACG ACGGCCGCGA CCTGGCGCTC GCCAATTGCT CGGGCTTCGT CGTGCCGGGG
ACCGAGCTGC GCCTCGTCGA CGGTGACGGC CAGGACGTGG CGCAGGGCGA GGTCGGCGAG
ATCTGGACGC GCGGCCCTGC GATCACGCCC GGCTACTGGA ATCGGCCGCG CGGCGACTAT
TTCGAGGGCG ACTGGTTCCG CACCGGCGAT TGCGGCCGGT TCGACGAGGC GGGCCGCCTC
TACGTCGTCG ACCGGCTGCG CGAGGTCTAT CGCTCGGGCG GGGAGAATAT CTATCCGGCC
GAGGTCGAGC TGGCGCTGGC TGACGCGCCG GGGGTCAGGG AGGTTGCGAT CATCGCCGTG
CCGGACGAGC GCTGGGGCGA GGTCGGCCTG GCGATCGTCG AGCCGATGCC GGGGGTCGAG
GTGAGCCTGG ACTCGCTGCT GGCCCATGCC GACGGCCGGC TCGCGCGGTT CAAGCTGCCC
CGCCATTTCG CGACGATCGC CGAGATGCCG CGCAGCGCGA CGCTCAAGAT CGACCGGGCG
CTGCTCAAGA AGACCTACGG CGCCGCGCCA ACAGTGTAA
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| Protein sequence | MKPWAKDWVA YHSALRPEAP AVTCVERGVT LRWGELDERV GRLAYQLRHH FGLQPGDRVA
LIAENDTRIF EVQFACMRAG LIWVPLSWRL AVGELVTLVR DADPAMLIQD DIWREVGDAV
ADATGIERRL LWSDDLARSD YDRLIADAPA AMPGGVHDED QLTHILYTSG TTGLPKGALC
SWGTLKHHAI NAAQTSRAAE RGNHHLNIVP LFHAGGLNTF SNPTLYWGGH VTTTRRFDPA
VALRLLTDPA VGITHLCGVL QMYELITALP AFAEARFPTL RNGLFGGWGP KTVWVHQTWQ
DRGFFLQLSY GSTEQGPLVT VLDDGRDLAL ANCSGFVVPG TELRLVDGDG QDVAQGEVGE
IWTRGPAITP GYWNRPRGDY FEGDWFRTGD CGRFDEAGRL YVVDRLREVY RSGGENIYPA
EVELALADAP GVREVAIIAV PDERWGEVGL AIVEPMPGVE VSLDSLLAHA DGRLARFKLP
RHFATIAEMP RSATLKIDRA LLKKTYGAAP TV
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