| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1033 |
|---|
| Symbol | |
|---|
| ID | 5199946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1149705 |
|---|
| End bp | 1150547 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640580578 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001261537 |
|---|
| Protein GI | 148553955 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0702791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCC GGCCGGTCCG CGCGACCAGC GTCGAGGGCC TGGCGATCGT CGGCGAGCTG
CGCGGCCGGG GCGACGCGCC GCTCGTCCTG CTGCTGCACG GCGGCGGCCA GACCCGCCAC
GCCTGGACGG GCACCGCCGA CCATCTGCTC GGCACCGGCT TCGACGTCGG CAGCTATGAC
GCGCGCGGCC ATGGCGACAG CGACTGGGCG GCCGACCGGG ACTATTCGCT GCCCGCCCAT
GGCCGCGACC TCGTCGCCTT CCTGCGCGCG GCCGGGCGGC CGGCGGCGCT GGTCGGCGCA
TCGATGGGCG GGATCAGCGC GCTGTTCGCC GCCGCCGAGG CGCCCGAACT GGTCCGCGCG
CTGGTGCTGG TCGACATCGT GCCGCGCTTC GCGCCCGAGG GCGTCGCGCG GGTCCGCAAC
TTCATGCAGG CGCATCCCGA CGGTTTCGCC ACCATCGAGG ATGCGGCGGC GGCGGTCCAC
GCCTACAACC CCAACCGCGC GCGATCGAAG AACCCGTCCG GGCTGATGCG GTCGCTGCGC
GAGGGCGCCG ACGGGCGGCT GCGCTGGCAC TGGGACCCGG CGGTGGTCGG CGACGCGCCG
ACCGAGGCGC TGGCCGACAT GCTGAGCGAG CGGCTCGCCG CGCTGCCCGC CAGCCTGCCG
CTGATGCTGA TCTCGGGCGC GCAGAGCGAC GTGGTCGACC CGCAGGCCGT CGCCGGCTTC
CGCGCCCAGG CGCCGCATGC CGAGATCGTC GCGGTCGACC GCGCCGGCCA CATGGTCGCG
GGCGACCGCA ACGACGCCTT CAGCGACGCG ATCGCCGGCT TCTTGAGGCG GCGGTTGGGC
TGA
|
|---|
| Protein sequence | MTARPVRATS VEGLAIVGEL RGRGDAPLVL LLHGGGQTRH AWTGTADHLL GTGFDVGSYD
ARGHGDSDWA ADRDYSLPAH GRDLVAFLRA AGRPAALVGA SMGGISALFA AAEAPELVRA
LVLVDIVPRF APEGVARVRN FMQAHPDGFA TIEDAAAAVH AYNPNRARSK NPSGLMRSLR
EGADGRLRWH WDPAVVGDAP TEALADMLSE RLAALPASLP LMLISGAQSD VVDPQAVAGF
RAQAPHAEIV AVDRAGHMVA GDRNDAFSDA IAGFLRRRLG
|
|---|
| |