| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1031 |
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| Symbol | |
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| ID | 5196133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1148153 |
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| End bp | 1148944 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580577 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001261536 |
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| Protein GI | 148553954 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0687458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TCACACCCGG CCTGCTGAAC GGCAAGACCG CCTTCGTCGC GGGCGGATCG
AGCGGCATCA ACCTGGGCAT CGCCCAGGGG CTGGCGGCGG CCGGCGCGCG CATCGCGATC
ATCAGCCGCA AGATCGAGAA GGTCGAGGCG GCGGTCGCCG GGCTGAAGGC CGGCGGCGGC
GAGGCGCTCG GCTGGGCGGT CGACGTGCGC GACTATGCGG CGGTCGAGAA GAGCCTGGCC
GACACCCATG CCGCCTGGGG GCCGATCGAC ATCGTCGTCT CGGGCGCGGC GGGCAATTTC
CTGGCGCCGG TGCTCGGCAT GTCGGCCAAC GCCTTCAAGA CGGTGATCGA CATCGACCTG
CTCGGCACCT TCCACGTGCT GCGCGCCAGC CATGCCTTCC TGCGCAAGCC GGGCGCGTCG
CTGATCTCGA TCACCGCCGG CCAGGCGATC AACGCCACCC TGTTCCAGAG CCACGCCTGC
GCCGCCAAGG CAGGGATCAA CATGCTGACC CGGGTGCTGG CGATGGAATG GGGGCCCGAC
GGCATAAGGG TCAACGCGAT CGCGCCAGGC CCGATCGCCG ACACCGAGGG GATGGCGCGG
CTGACGCCCA CCCCGGAGTC CGAGGCCGCG CTGAAGGCGA TCATCCCCTT GCGCGACTAT
GGCACCAAGC AGGACATCGC CGATCTCGCT ATCTATCTGG CGAGCGATTC GGCGAAATAC
ATCACCGGAG CGATCCTGGA CTGCGACGGC GGGTCGTCGC TGGGCCGGGG GCTCCAGCCG
GCACAGGGAT GA
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| Protein sequence | MTTFTPGLLN GKTAFVAGGS SGINLGIAQG LAAAGARIAI ISRKIEKVEA AVAGLKAGGG
EALGWAVDVR DYAAVEKSLA DTHAAWGPID IVVSGAAGNF LAPVLGMSAN AFKTVIDIDL
LGTFHVLRAS HAFLRKPGAS LISITAGQAI NATLFQSHAC AAKAGINMLT RVLAMEWGPD
GIRVNAIAPG PIADTEGMAR LTPTPESEAA LKAIIPLRDY GTKQDIADLA IYLASDSAKY
ITGAILDCDG GSSLGRGLQP AQG
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