Gene Swit_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1024 
Symbol 
ID5198772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1142408 
End bp1142767 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID640580570 
Productlimonene-1,2-epoxide hydrolase 
Protein accessionYP_001261529 
Protein GI148553947 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4308] Limonene-1,2-epoxide hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.903777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0576424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG AGGAAACGGT GCTTGCCTTC ATCGAGGCAT GGAACCGGCT CGACGAGGAT 
CGCATCTACG GCCTGATGGC CGAGGACATC GTCTATCACA ACATGCCGAT GAAGCCGGTG
ACGGGGATCG CGGCGGTGCG GAAGGGCTTC GCCGCCTGGC CGGTCGACAC CTGCGAATGG
GTCGTCCTCA ACATCGCCAG CCGCGGCAAC GTCGTGCTGA CCGAGCGGGT CGACCGCTTC
ACCCGCGGCG AGGACCGCAT CACCATCCCG GTGATGGGGA CGTTCGAGGT CGCCGACGGC
CGGATCACCC ATTGGCGGGA CTATTTCGAC ATGGGCGCGA TGAAGCCGGA GGCCCGCTAG
 
Protein sequence
MSPEETVLAF IEAWNRLDED RIYGLMAEDI VYHNMPMKPV TGIAAVRKGF AAWPVDTCEW 
VVLNIASRGN VVLTERVDRF TRGEDRITIP VMGTFEVADG RITHWRDYFD MGAMKPEAR